RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 SLC25A13Q9UJS0 675 aa6.6□□□□□ -1.35
SDF2-205ENST00000587629 VPS28Q9UK41 221 aa6.6□□□□□ -1.35
SDF2-205ENST00000587629 CNTN6Q9UQ52 1028 aa6.6□□□□□ -1.35
SDF2-205ENST00000587629 SNX10Q9Y5X0 201 aa6.6□□□□□ -1.35
SDF2-205ENST00000587629 IGSF10Q6WRI0 2623 aa6.6□□□□□ -1.35
SDF2-205ENST00000587629 BPTFQ12830 3046 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 APC2O95996 2303 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 A0A087WV48 116 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 A0A1B0GVM2 712 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 TCAF2A6NFQ2 919 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 BECN2A8MW95 431 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 K7ERQ8 282 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 M0QYT0 321 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 RNF103O00237 685 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 KPNA3O00505 521 aaPredicted RBP6.59□□□□□ -1.35
SDF2-205ENST00000587629 TRIM38O00635 465 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 FFAR2O15552 330 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 LATO43561 262 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 PLRG1O43660 514 aaKnown RBP6.59□□□□□ -1.35
SDF2-205ENST00000587629 SNAP91O60641 907 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 RNGTTO60942 597 aaKnown RBP6.59□□□□□ -1.35
SDF2-205ENST00000587629 PAGE1O75459 146 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 CNTN5O94779 1100 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 ENDOD1O94919 500 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 ZIC2O95409 532 aaPredicted RBP6.59□□□□□ -1.35
SDF2-205ENST00000587629 GNA14O95837 355 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 MT-CO1P00395 513 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 PRB1P04280 392 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 ERBB2P04626 1255 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 PNMA6AP0CW24 399 aaPredicted RBP6.59□□□□□ -1.35
SDF2-205ENST00000587629 SLC2A3P11169 496 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 MYF5P13349 255 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 PRLRP16471 622 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 TFE3P19532 575 aaPredicted RBP6.59□□□□□ -1.35
SDF2-205ENST00000587629 EIF2S3P41091 472 aaKnown RBP6.59□□□□□ -1.35
SDF2-205ENST00000587629 PPP1R2P41236 205 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 ABCG1P45844 678 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 ACADVLP49748 655 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 PLK1P53350 603 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 EIF4EBP2Q13542 120 aaPredicted RBP6.59□□□□□ -1.35
SDF2-205ENST00000587629 SLC12A1Q13621 1099 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 EFHC1Q5JVL4 640 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 AGBL4Q5VU57 503 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 FAM46CQ5VWP2 391 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 NAPEPLDQ6IQ20 393 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 TRIM65Q6PJ69 517 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 LINGO4Q6UY18 593 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 C11orf57Q6ZUT1 292 aaPredicted RBP6.59□□□□□ -1.35
SDF2-205ENST00000587629 FAM183BPQ6ZVS7 135 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 BEND5Q7L4P6 421 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 TMC6Q7Z403 805 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 DSG4Q86SJ6 1040 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 PLPP6Q8IY26 295 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 SLC25A45Q8N413 288 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 MFSD2AQ8NA29 543 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 ATP11CQ8NB49 1132 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 C1orf131Q8NDD1 294 aaKnown RBP6.59□□□□□ -1.35
SDF2-205ENST00000587629 TSC1Q92574 1164 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 NXPE2Q96DL1 559 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 ALG14Q96F25 216 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 SLC2A13Q96QE2 648 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 MUC3BQ9H195 1237 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 TNKS2Q9H2K2 1166 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 SYNCQ9H7C4 482 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 FZD3Q9NPG1 666 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 TMPRSS4Q9NRS4 437 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 PPM1HQ9ULR3 514 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 PCDHGA1Q9Y5H4 931 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 RAI2Q9Y5P3 530 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 HS3ST4Q9Y661 456 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 CABIN1Q9Y6J0 2220 aa6.59□□□□□ -1.35
SDF2-205ENST00000587629 SMG1Q96Q15 3661 aaKnown RBP6.58□□□□□ -1.36
SDF2-205ENST00000587629 GOLGA4Q13439 2230 aaKnown RBP6.58□□□□□ -1.36
SDF2-205ENST00000587629 A0A1W2PQU0 124 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 C10orf142B7Z368 130 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 C1QTNF3-AMACRE9PGA6 284 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 PRAMEF26H0Y7S4 382 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 MCF2LO15068 1137 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 YKT6O15498 198 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 SMAD6O43541 496 aaKnown RBP6.58□□□□□ -1.36
SDF2-205ENST00000587629 SIGLEC6O43699 453 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 TLX3O43711 291 aaPredicted RBP6.58□□□□□ -1.36
SDF2-205ENST00000587629 ATP9BO43861 1147 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 BRINP1O60477 761 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 HSF2BPO75031 334 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 SRGAP2O75044 1071 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 PCDH8O95206 1070 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 ADCY5O95622 1261 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 CTSLP07711 333 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 C1SP09871 688 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 CKMT2P17540 419 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 GLDCP23378 1020 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 RRM1P23921 792 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 KRT9P35527 623 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 RXRGP48443 463 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 OXCT1P55809 520 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 MARSP56192 900 aaKnown RBP6.58□□□□□ -1.36
SDF2-205ENST00000587629 CLDN2P57739 230 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 TAS2R38P59533 333 aa6.58□□□□□ -1.36
SDF2-205ENST00000587629 CCDC173Q0VFZ6 552 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms