RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 OR8D1Q8WZ84 308 aa12.22□□□□□ -0.45
BRCA1-225ENST00000586385 KLK6Q92876 244 aa12.22□□□□□ -0.45
BRCA1-225ENST00000586385 COL26A1Q96A83 441 aa12.22□□□□□ -0.45
BRCA1-225ENST00000586385 ARRDC3Q96B67 414 aa12.22□□□□□ -0.45
BRCA1-225ENST00000586385 CEP63Q96MT8 703 aa12.22□□□□□ -0.45
BRCA1-225ENST00000586385 SLC2A13Q96QE2 648 aa12.22□□□□□ -0.45
BRCA1-225ENST00000586385 PSMB7Q99436 277 aa12.22□□□□□ -0.45
BRCA1-225ENST00000586385 FZD3Q9NPG1 666 aa12.22□□□□□ -0.45
BRCA1-225ENST00000586385 ANLNQ9NQW6 1124 aa12.22□□□□□ -0.45
BRCA1-225ENST00000586385 KLHL11Q9NVR0 708 aa12.22□□□□□ -0.45
BRCA1-225ENST00000586385 RMND1Q9NWS8 449 aa12.22□□□□□ -0.45
BRCA1-225ENST00000586385 ZFR2Q9UPR6 939 aaKnown RBP12.22□□□□□ -0.45
BRCA1-225ENST00000586385 DOCK9Q9BZ29 2069 aa12.22□□□□□ -0.45
BRCA1-225ENST00000586385 BECN2A8MW95 431 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 K7ERQ8 282 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 CAPN9O14815 690 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 SLC31A1O15431 190 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 P4HA2O15460 535 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 FFAR2O15552 330 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 OPA1O60313 960 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 RNGTTO60942 597 aaKnown RBP12.21□□□□□ -0.45
BRCA1-225ENST00000586385 PIAS2O75928 621 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 MPOP05164 745 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 ACTN2P35609 894 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 NUDT1P36639 197 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 CXADRP78310 365 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 KCNMA1Q12791 1236 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 KCNH2Q12809 1159 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 PDCLQ13371 301 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 AUHQ13825 339 aaKnown RBP12.21□□□□□ -0.45
BRCA1-225ENST00000586385 STAT4Q14765 748 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 MEA1Q16626 185 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 SETMARQ53H47 684 aaPredicted RBP12.21□□□□□ -0.45
BRCA1-225ENST00000586385 ISM2Q6H9L7 571 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 GCNT7Q6ZNI0 430 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 TRIM59Q8IWR1 403 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 DEFB106AQ8N104 65 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 SLC22A18ASQ8N1D0 253 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 SH2D3CQ8N5H7 860 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 ATP6V0D2Q8N8Y2 350 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 OR13H1Q8NG92 308 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 ZNF606Q8WXB4 792 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 KLHDC7BQ96G42 594 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 SEMA4CQ9C0C4 833 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 INTS2Q9H0H0 1204 aaKnown RBP12.21□□□□□ -0.45
BRCA1-225ENST00000586385 THAP9Q9H5L6 903 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 PREBQ9HCU5 417 aa12.21□□□□□ -0.45
BRCA1-225ENST00000586385 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.21□□□□□ -0.45
BRCA1-225ENST00000586385 A0A1W2PQU0 124 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 PPP1R3GB7ZBB8 358 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 ALOX15BO15296 676 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 SMAD6O43541 496 aaKnown RBP12.2□□□□□ -0.46
BRCA1-225ENST00000586385 SNAP91O60641 907 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 DXOO77932 396 aaKnown RBP12.2□□□□□ -0.46
BRCA1-225ENST00000586385 CNTN5O94779 1100 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 LETM1O95202 739 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-225ENST00000586385 THEGLP0DJG4 465 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 CKMT1AP12532 417 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 SRCP12931 536 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 NNMTP40261 264 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 CLDN2P57739 230 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 E2F1Q01094 437 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 FGL2Q14314 439 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 C5orf22Q49AR2 442 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 ACCSLQ4AC99 568 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 TTC39BQ5VTQ0 682 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-225ENST00000586385 FAM46CQ5VWP2 391 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 SEL1L3Q68CR1 1132 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 GJB7Q6PEY0 223 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 DSG4Q86SJ6 1040 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 ZNF683Q8IZ20 524 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 CHST14Q8NCH0 376 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 OR2A12Q8NGT7 310 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 NAF1Q96HR8 494 aaKnown RBP12.2□□□□□ -0.46
BRCA1-225ENST00000586385 CPXM1Q96SM3 734 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 FAM204AQ9H8W3 233 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 CPNE5Q9HCH3 593 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 ASCL3Q9NQ33 180 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 GPR27Q9NS67 375 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 DDIT4Q9NX09 232 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 MAN1B1Q9UKM7 699 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 VANGL2Q9ULK5 521 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 HS3ST2Q9Y278 367 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 TBC1D30Q9Y2I9 924 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 HS3ST4Q9Y661 456 aa12.2□□□□□ -0.46
BRCA1-225ENST00000586385 ATMQ13315 3056 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 SYNJ2BP-COX16A0A087WUM0 186 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 C1QTNF3-AMACRE9PGA6 284 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 CASC3O15234 703 aaKnown RBP12.19□□□□□ -0.46
BRCA1-225ENST00000586385 BNIP3LO60238 219 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 MAGEC1O60732 1142 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 ZNF821O75541 412 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-225ENST00000586385 GRAP2O75791 330 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 NEBLO76041 1014 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 KRT5P13647 590 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 TFE3P19532 575 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-225ENST00000586385 NUCB2P80303 420 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 APBA1Q02410 837 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 CFHR1Q03591 330 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms