RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 SH2D3CQ8N5H7 860 aa22.59■■□□□ 1.21
SNF8-216ENST00000573795 PIP4K2CQ8TBX8 421 aa22.59■■□□□ 1.21
SNF8-216ENST00000573795 RNF34Q969K3 372 aa22.59■■□□□ 1.21
SNF8-216ENST00000573795 SIX2Q9NPC8 291 aa22.59■■□□□ 1.21
SNF8-216ENST00000573795 SLC25A13Q9UJS0 675 aa22.59■■□□□ 1.21
SNF8-216ENST00000573795 CA5BQ9Y2D0 317 aa22.59■■□□□ 1.21
SNF8-216ENST00000573795 TBC1D30Q9Y2I9 924 aa22.59■■□□□ 1.21
SNF8-216ENST00000573795 GCN1Q92616 2671 aaKnown RBP22.58■■□□□ 1.21
SNF8-216ENST00000573795 MCF2LO15068 1137 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 ALOX15BO15296 676 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 PAGE1O75459 146 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 CTSLP07711 333 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 NME3Q13232 169 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 ACCSLQ4AC99 568 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 FAM46CQ5VWP2 391 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 OR6B2Q6IFH4 312 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 GBP6Q6ZN66 633 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 C11orf57Q6ZUT1 292 aaPredicted RBP22.58■■□□□ 1.21
SNF8-216ENST00000573795 SLC26A9Q7LBE3 791 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 DSG4Q86SJ6 1040 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 IQCHQ86VS3 1027 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 OXR1Q8N573 874 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 FAM81BQ96LP2 452 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 PSMB7Q99436 277 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 RWDD2AQ9UIY3 292 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 DMTF1Q9Y222 760 aa22.58■■□□□ 1.21
SNF8-216ENST00000573795 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.57■■□□□ 1.2
SNF8-216ENST00000573795 RNF103O00237 685 aa22.57■■□□□ 1.2
SNF8-216ENST00000573795 CNTN5O94779 1100 aa22.57■■□□□ 1.2
SNF8-216ENST00000573795 FGFR1OPO95684 399 aaKnown RBP22.57■■□□□ 1.2
SNF8-216ENST00000573795 MT-CO1P00395 513 aa22.57■■□□□ 1.2
SNF8-216ENST00000573795 PNMA6AP0CW24 399 aaPredicted RBP22.57■■□□□ 1.2
SNF8-216ENST00000573795 TFE3P19532 575 aaPredicted RBP22.57■■□□□ 1.2
SNF8-216ENST00000573795 PON1P27169 355 aa22.57■■□□□ 1.2
SNF8-216ENST00000573795 ZNF177Q13360 481 aaPredicted RBP22.57■■□□□ 1.2
SNF8-216ENST00000573795 BECN1Q14457 450 aa22.57■■□□□ 1.2
SNF8-216ENST00000573795 ARTNQ5T4W7 220 aa22.57■■□□□ 1.2
SNF8-216ENST00000573795 PIP5KL1Q5T9C9 394 aa22.57■■□□□ 1.2
SNF8-216ENST00000573795 HES3Q5TGS1 186 aa22.57■■□□□ 1.2
SNF8-216ENST00000573795 ZNF683Q8IZ20 524 aa22.57■■□□□ 1.2
SNF8-216ENST00000573795 PIGVQ9NUD9 493 aa22.57■■□□□ 1.2
SNF8-216ENST00000573795 VPS28Q9UK41 221 aa22.57■■□□□ 1.2
SNF8-216ENST00000573795 HS3ST2Q9Y278 367 aa22.57■■□□□ 1.2
SNF8-216ENST00000573795 ASXL3Q9C0F0 2248 aa22.57■■□□□ 1.2
SNF8-216ENST00000573795 C1QTNF3-AMACRE9PGA6 284 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 TLX3O43711 291 aaPredicted RBP22.56■■□□□ 1.2
SNF8-216ENST00000573795 CLDN11O75508 207 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 ADCY5O95622 1261 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 CDK4P11802 303 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 SRCP12931 536 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 JUPP14923 745 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 CLCN1P35523 988 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 NUDT1P36639 197 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 SLC6A3Q01959 620 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 TARDBPQ13148 414 aaKnown RBP eCLIP22.56■■□□□ 1.2
SNF8-216ENST00000573795 EXOC3L4Q17RC7 722 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 ALFQ53S48 1182 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 ZNF397Q8NF99 534 aaPredicted RBP22.56■■□□□ 1.2
SNF8-216ENST00000573795 NXPE2Q96DL1 559 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 NPY6RQ99463 290 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 PLCB1Q9NQ66 1216 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 ARHGEF38Q9NXL2 777 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 SNX10Q9Y5X0 201 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 DOCK4Q8N1I0 1966 aa22.56■■□□□ 1.2
SNF8-216ENST00000573795 GTPBP10A4D1E9 387 aaKnown RBP22.55■■□□□ 1.2
SNF8-216ENST00000573795 M0QYT0 321 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 SNAP91O60641 907 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 SDC3O75056 442 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 NOS2P35228 1153 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 HNF1BP35680 557 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 CDH4P55283 916 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 OVGP1Q12889 678 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 PROX2Q3B8N5 592 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 DPY19L2P1Q6NXN4 242 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 SLC47A2Q86VL8 602 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 TMEM145Q8NBT3 493 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 ARRDC3Q96B67 414 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 PPP1R9BQ96SB3 815 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 SIK2Q9H0K1 926 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 CAAP1Q9H8G2 361 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 PREBQ9HCU5 417 aa22.55■■□□□ 1.2
SNF8-216ENST00000573795 PRAMEF26H0Y7S4 382 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 K7ERQ8 282 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 BNIP3LO60238 219 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 CKMT2P17540 419 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 CXCR3P49682 368 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 MTA1Q13330 715 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 SETMARQ53H47 684 aaPredicted RBP22.54■■□□□ 1.2
SNF8-216ENST00000573795 C6orf118Q5T5N4 469 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 OR2A12Q8NGT7 310 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 DCBLD2Q96PD2 775 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 NOX5Q96PH1 765 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 TKTL2Q9H0I9 626 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 MUC3BQ9H195 1237 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 KIAA1468Q9P260 1216 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 VPS51Q9UID3 782 aa22.54■■□□□ 1.2
SNF8-216ENST00000573795 FOXN3O00409 490 aaPredicted RBP22.53■■□□□ 1.2
SNF8-216ENST00000573795 TRIM38O00635 465 aa22.53■■□□□ 1.2
SNF8-216ENST00000573795 SMAD6O43541 496 aaKnown RBP22.53■■□□□ 1.2
SNF8-216ENST00000573795 RNGTTO60942 597 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms