RNA–Protein interactions for RNA: ENST00000566910.1

CPNE2-208, Transcript of copine 2, human

TSL 5

Gene CPNE2, Length 938 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE2-208	ENST00000566910	CNTN1	Q12860	1018 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	RAPGEF1	Q13905	1077 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	MAN2A1	Q16706	1144 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	MIIP	Q5JXC2	388 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	TAF3	Q5VWG9	929 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	DPY19L2P1	Q6NXN4	242 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	SLC26A9	Q7LBE3	791 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	SH2D3C	Q8N5H7	860 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	PIP4K2C	Q8TBX8	421 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	KLK6	Q92876	244 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	SKA1	Q96BD8	255 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	TKTL2	Q9H0I9	626 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	MUC3B	Q9H195	1237 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	PDCL3	Q9H2J4	239 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	WDCP	Q9H6R7	721 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	ARHGAP20	Q9P2F6	1191 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	RAX	Q9Y2V3	346 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	GPSM3	Q9Y4H4	160 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910	OR51B4	Q9Y5P0	310 aa		13.92	□□□□□ -0.18
CPNE2-208	ENST00000566910		K7ERQ8	282 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	TLR4	O00206	839 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	RNF103	O00237	685 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	PES1	O00541	588 aa	Known RBP	13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	ENC1	O14682	589 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	PLRG1	O43660	514 aa	Known RBP	13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	DFNA5	O60443	496 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	LDOC1	O95751	146 aa	Predicted RBP	13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	RHOC	P08134	193 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	OXCT1	P55809	520 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	KCNMA1	Q12791	1236 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	DRAP1	Q14919	205 aa	Predicted RBP	13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	COL28A1	Q2UY09	1125 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	DPCR1	Q3MIW9	517 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	VWA3B	Q502W6	1294 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	AGBL4	Q5VU57	503 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	PRPF39	Q86UA1	669 aa	Known RBP	13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	SPATS2	Q86XZ4	545 aa	Known RBP	13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	FAM71A	Q8IYT1	594 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	GALNT15	Q8N3T1	639 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	MLKL	Q8NB16	471 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	SAP25	Q8TEE9	199 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	CNDP2	Q96KP4	475 aa	Known RBP	13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	TBCB	Q99426	244 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	PSMB7	Q99436	277 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	NPY6R	Q99463	290 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	MYOC	Q99972	504 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	TUBGCP2	Q9BSJ2	902 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	NDST4	Q9H3R1	872 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	CAAP1	Q9H8G2	361 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	GDF3	Q9NR23	364 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	MPP6	Q9NZW5	540 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	FHOD1	Q9Y613	1164 aa		13.91	□□□□□ -0.18
CPNE2-208	ENST00000566910	LOC400499	M0QZD8	3231 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910		A0A0D9SEW6	157 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	GOLGA8S	H3BPF8	625 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	SMAD6	O43541	496 aa	Known RBP	13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	LAT	O43561	262 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	CLDN11	O75508	207 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	CTSL	P07711	333 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	SRC	P12931	536 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	GLDC	P23378	1020 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	RRM1	P23921	792 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	CDH4	P55283	916 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	SNX16	P57768	344 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	NXPH1	P58417	271 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	TAS2R38	P59533	333 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	DEUP1	Q05D60	604 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	CAMK2B	Q13554	666 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	INAVA	Q3KP66	663 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	FAM46C	Q5VWP2	391 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	NAPEPLD	Q6IQ20	393 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	TRNP1	Q6NT89	227 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	LINGO4	Q6UY18	593 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	TFAP2D	Q7Z6R9	452 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	DSG4	Q86SJ6	1040 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	ATP11C	Q8NB49	1132 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	ZNF397	Q8NF99	534 aa	Predicted RBP	13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	PPP1R9B	Q96SB3	815 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	ARHGEF38	Q9NXL2	777 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	PPM1H	Q9ULR3	514 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	TBC1D30	Q9Y2I9	924 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	ATRX	P46100	2492 aa		13.9	□□□□□ -0.18
CPNE2-208	ENST00000566910	C1QTNF3-AMACR	E9PGA6	284 aa		13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	MCF2L	O15068	1137 aa		13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	SLC31A1	O15431	190 aa		13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	RNGTT	O60942	597 aa	Known RBP	13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	SRGAP2	O75044	1071 aa		13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	SDC3	O75056	442 aa		13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	ENDOD1	O94919	500 aa		13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	CYP11B1	P15538	503 aa		13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	EPHA8	P29322	1005 aa	Predicted RBP	13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	CXCR3	P49682	368 aa		13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	VASP	P50552	380 aa	Predicted RBP	13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	COL9A2	Q14055	689 aa	Predicted RBP	13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	SMAD1	Q15797	465 aa	Known RBP	13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	C5orf22	Q49AR2	442 aa		13.89	□□□□□ -0.19
CPNE2-208	ENST00000566910	SLC45A4	Q5BKX6	768 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms