RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 SAP25Q8TEE9 199 aa24.52■■□□□ 1.52
NME3-206ENST00000564252 TUBGCP2Q9BSJ2 902 aa24.52■■□□□ 1.52
NME3-206ENST00000564252 TKTL2Q9H0I9 626 aa24.52■■□□□ 1.52
NME3-206ENST00000564252 CLSTN2Q9H4D0 955 aa24.52■■□□□ 1.52
NME3-206ENST00000564252 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.52■■□□□ 1.52
NME3-206ENST00000564252 ACACAQ13085 2346 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 TLR4O00206 839 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 MCF2LO15068 1137 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 PRKCSHP14314 528 aaPredicted RBP24.51■■□□□ 1.51
NME3-206ENST00000564252 GABRB2P47870 512 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 SULT1E1P49888 294 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 NXPH1P58417 271 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 RNASE9P60153 205 aaKnown RBP24.51■■□□□ 1.51
NME3-206ENST00000564252 KCNMA1Q12791 1236 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 CNTN1Q12860 1018 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 DRAP1Q14919 205 aaPredicted RBP24.51■■□□□ 1.51
NME3-206ENST00000564252 SMAD1Q15797 465 aaKnown RBP24.51■■□□□ 1.51
NME3-206ENST00000564252 DPCR1Q3MIW9 517 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 ALFQ53S48 1182 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 TMEM35BQ8NCS4 154 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 PIP4K2CQ8TBX8 421 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 PGAP3Q96FM1 320 aaPredicted RBP24.51■■□□□ 1.51
NME3-206ENST00000564252 PSMB7Q99436 277 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 MUC3BQ9H195 1237 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 WDCPQ9H6R7 721 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 STAP1Q9ULZ2 295 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 HS3ST2Q9Y278 367 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 GPSM3Q9Y4H4 160 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 FHOD1Q9Y613 1164 aa24.51■■□□□ 1.51
NME3-206ENST00000564252 GOLGA4Q13439 2230 aaKnown RBP24.5■■□□□ 1.51
NME3-206ENST00000564252 YKT6O15498 198 aa24.5■■□□□ 1.51
NME3-206ENST00000564252 SRCP12931 536 aa24.5■■□□□ 1.51
NME3-206ENST00000564252 CYP11B1P15538 503 aa24.5■■□□□ 1.51
NME3-206ENST00000564252 CAMK2BQ13554 666 aa24.5■■□□□ 1.51
NME3-206ENST00000564252 POM121L1PQ3SYA9 428 aa24.5■■□□□ 1.51
NME3-206ENST00000564252 CCDC157Q569K6 752 aa24.5■■□□□ 1.51
NME3-206ENST00000564252 HSP90AA4PQ58FG1 418 aa24.5■■□□□ 1.51
NME3-206ENST00000564252 SLC45A4Q5BKX6 768 aa24.5■■□□□ 1.51
NME3-206ENST00000564252 PRPF39Q86UA1 669 aaKnown RBP24.5■■□□□ 1.51
NME3-206ENST00000564252 TRIM69Q86WT6 500 aa24.5■■□□□ 1.51
NME3-206ENST00000564252 DKK4Q9UBT3 224 aa24.5■■□□□ 1.51
NME3-206ENST00000564252 SNX10Q9Y5X0 201 aa24.5■■□□□ 1.51
NME3-206ENST00000564252 C1QTNF3-AMACRE9PGA6 284 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 MT-CO1P00395 513 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 ITGAVP06756 1048 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 EPHA8P29322 1005 aaPredicted RBP24.49■■□□□ 1.51
NME3-206ENST00000564252 MAT2AP31153 395 aaKnown RBP24.49■■□□□ 1.51
NME3-206ENST00000564252 SCNN1AP37088 669 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 RAPGEF1Q13905 1077 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 KLHDC7AQ5VTJ3 777 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 DHRS13Q6UX07 377 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 SPATS2Q86XZ4 545 aaKnown RBP24.49■■□□□ 1.51
NME3-206ENST00000564252 XYLT1Q86Y38 959 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 MFSD2AQ8NA29 543 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 C18orf8Q96DM3 657 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 TBCBQ99426 244 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 NAA15Q9BXJ9 866 aaKnown RBP24.49■■□□□ 1.51
NME3-206ENST00000564252 PDCL3Q9H2J4 239 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 ERVMER34-1Q9H9K5 563 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 DMTF1Q9Y222 760 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 ADAMTS20P59510 1910 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 DOCK9Q9BZ29 2069 aa24.49■■□□□ 1.51
NME3-206ENST00000564252 FAM149AA5PLN7 773 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 DRGXA6NNA5 263 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 CBX4O00257 560 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 ENC1O14682 589 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 SNAP91O60641 907 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 CTSLP07711 333 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 RHOCP08134 193 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 ZNF18P17022 549 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 ERCC5P28715 1186 aaPredicted RBP24.48■■□□□ 1.51
NME3-206ENST00000564252 NUDT1P36639 197 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 RXRGP48443 463 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 ARRB1P49407 418 aaPredicted RBP24.48■■□□□ 1.51
NME3-206ENST00000564252 KRT83P78385 493 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 DEUP1Q05D60 604 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 SLC25A52Q3SY17 297 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 ARTNQ5T4W7 220 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 FAM102AQ5T9C2 384 aaPredicted RBP24.48■■□□□ 1.51
NME3-206ENST00000564252 IQCHQ86VS3 1027 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 TMPRSS4Q9NRS4 437 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 VPS51Q9UID3 782 aa24.48■■□□□ 1.51
NME3-206ENST00000564252 FAM170AA1A519 330 aa24.47■■□□□ 1.51
NME3-206ENST00000564252 BNIP3LO60238 219 aa24.47■■□□□ 1.51
NME3-206ENST00000564252 LDOC1O95751 146 aaPredicted RBP24.47■■□□□ 1.51
NME3-206ENST00000564252 F9P00740 461 aa24.47■■□□□ 1.51
NME3-206ENST00000564252 HOXB3P14651 431 aaPredicted RBP24.47■■□□□ 1.51
NME3-206ENST00000564252 TAS2R38P59533 333 aa24.47■■□□□ 1.51
NME3-206ENST00000564252 BNIP3Q12983 259 aa24.47■■□□□ 1.51
NME3-206ENST00000564252 TAF3Q5VWG9 929 aa24.47■■□□□ 1.51
NME3-206ENST00000564252 SETD3Q86TU7 594 aaPredicted RBP24.47■■□□□ 1.51
NME3-206ENST00000564252 ERICH1Q86X53 443 aa24.47■■□□□ 1.51
NME3-206ENST00000564252 OXR1Q8N573 874 aa24.47■■□□□ 1.51
NME3-206ENST00000564252 CNDP2Q96KP4 475 aaKnown RBP24.47■■□□□ 1.51
NME3-206ENST00000564252 C1orf74Q96LT6 269 aa24.47■■□□□ 1.51
NME3-206ENST00000564252 C2orf49Q9BVC5 232 aaPredicted RBP24.47■■□□□ 1.51
NME3-206ENST00000564252 CHMP5Q9NZZ3 219 aa24.47■■□□□ 1.51
NME3-206ENST00000564252 PAXBP1Q9Y5B6 917 aa24.47■■□□□ 1.51
NME3-206ENST00000564252 PCDHGA1Q9Y5H4 931 aa24.47■■□□□ 1.51
NME3-206ENST00000564252 ATRXP46100 2492 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms