RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 TMEM30AQ9NV96 361 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 APPL1Q9UKG1 709 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 DERAQ9Y315 318 aa11.04□□□□□ -0.64
HDGFL3-204ENST00000563790 CDC14CA4D256 554 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 A6NNZ2 444 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 YY2O15391 372 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 TBX18O95935 607 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 RECKO95980 971 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 IGHDP01880 384 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 AKT2P31751 481 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 STAT1P42224 750 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 NPTX2P47972 431 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 LHX1P48742 406 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 RAB15P59190 212 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 NUCB1Q02818 461 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 MAPRE1Q15691 268 aaKnown RBP11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 KYAT1Q16773 422 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 PTAR1Q7Z6K3 402 aaPredicted RBP11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 NUP93Q8N1F7 819 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 RCBTB1Q8NDN9 531 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 NRGNQ92686 78 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 FAM129BQ96TA1 746 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 POLD4Q9HCU8 107 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 FZD3Q9NPG1 666 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 CRTAC1Q9NQ79 661 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 AGPAT4Q9NRZ5 378 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 SLC39A1Q9NY26 324 aa11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 TMEM184BQ9Y519 407 aaPredicted RBP11.03□□□□□ -0.64
HDGFL3-204ENST00000563790 FRMD3A2A2Y4 597 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 CCDC169A6NNP5 214 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 INAFM1C9JVW0 142 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 FAM189A1O60320 539 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 HUS1O60921 280 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 CEACAM4O75871 244 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 CYBBP04839 570 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 PPP2R2BQ00005 443 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 PRRT3Q5FWE3 981 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 MBLAC2Q68D91 279 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 RPTNQ6XPR3 784 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 SPRED1Q7Z699 444 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 KCNMB4Q86W47 210 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 CHD1LQ86WJ1 897 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 RTP4Q96DX8 246 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 ZNF560Q96MR9 790 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 ALPK1Q96QP1 1244 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 LARP6Q9BRS8 491 aaKnown RBP11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 ENKD1Q9H0I2 346 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 DPP3Q9NY33 737 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 APOBEC3BQ9UH17 382 aaKnown RBP11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 ZNF510Q9Y2H8 683 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 RPS6KL1Q9Y6S9 549 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 TRRAPQ9Y4A5 3859 aa11.02□□□□□ -0.65
HDGFL3-204ENST00000563790 DOCK10Q96BY6 2186 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 FAM92AA1XBS5 289 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 B4E171 279 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 M0R2N6 131 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 KLKB1P03952 638 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 PNLIPP16233 465 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 PTPN1P18031 435 aaKnown RBP11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 HNRNPH3P31942 346 aaKnown RBP11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 TSPAN7P41732 249 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 CACNA2D1P54289 1103 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 CYP27A1Q02318 531 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 C1orf61Q13536 156 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 MAP9Q49MG5 647 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 CPZQ66K79 652 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 ANKS6Q68DC2 871 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 ZPBP2Q6X784 338 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 RBFAQ8N0V3 343 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 Q8N9G6 341 aaPredicted RBP11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 CCDC120Q96HB5 630 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 PCED1BQ96HM7 432 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 TREX2Q9BQ50 279 aaPredicted RBP11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 SYT15Q9BQS2 421 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 LRRC61Q9BV99 259 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 CLPBQ9H078 707 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 IL37Q9NZH6 218 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 SUCOQ9UBS9 1254 aaKnown RBP11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 USP25Q9UHP3 1055 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 B3GNT3Q9Y2A9 372 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 C2CD2Q9Y426 696 aa11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 RBM19Q9Y4C8 960 aaKnown RBP11.01□□□□□ -0.65
HDGFL3-204ENST00000563790 SERINC4A6NH21 518 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 STC2O76061 302 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 REC8O95072 547 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 CPNE6O95741 557 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 KRT19P08727 400 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 EDN3P14138 238 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 GSPT1P15170 499 aaKnown RBP11□□□□□ -0.65
HDGFL3-204ENST00000563790 GCFC2P16383 781 aaKnown RBP11□□□□□ -0.65
HDGFL3-204ENST00000563790 HOXD9P28356 352 aaPredicted RBP11□□□□□ -0.65
HDGFL3-204ENST00000563790 MZF1P28698 734 aaPredicted RBP11□□□□□ -0.65
HDGFL3-204ENST00000563790 CDC27P30260 824 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 ATP5C1P36542 298 aaKnown RBP11□□□□□ -0.65
HDGFL3-204ENST00000563790 PNPLA4P41247 253 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 PGFP49763 221 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 CCL11P51671 97 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 PEX3P56589 373 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 PSMC1P62191 440 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms