RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 HLA-EP13747 358 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 HOXB2P14652 356 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 ITPKBP27987 946 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 CD6P30203 668 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 NTSR1P30989 418 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 EIF2S3P41091 472 aaKnown RBP5.13□□□□□ -1.59
ATXN3-232ENST00000555381 PNPLA4P41247 253 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 MAGEA11P43364 429 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 ZXDBP98169 803 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 MYL7Q01449 175 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 SMAD1Q15797 465 aaKnown RBP5.13□□□□□ -1.59
ATXN3-232ENST00000555381 HLA-BQ31612 363 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 CFAP221Q4G0U5 840 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 ACBD5Q5T8D3 534 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-232ENST00000555381 BTBD8Q5XKL5 378 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 GPR155Q7Z3F1 870 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 TMPRSS12Q86WS5 348 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 DDX42Q86XP3 938 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATXN3-232ENST00000555381 MARCH9Q86YJ5 346 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 SPATA2LQ8IUW3 424 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-232ENST00000555381 SFTPA1Q8IWL2 248 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 SCN4BQ8IWT1 228 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 C4orf32Q8N8J7 132 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 RCBTB1Q8NDN9 531 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 STKLD1Q8NE28 680 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 ENGASEQ8NFI3 743 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 CADM4Q8NFZ8 388 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 IPO4Q8TEX9 1081 aaKnown RBP5.13□□□□□ -1.59
ATXN3-232ENST00000555381 DIO2Q92813 273 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 ZNF669Q96BR6 464 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-232ENST00000555381 OTUB2Q96DC9 234 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 FUBP3Q96I24 572 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATXN3-232ENST00000555381 SPATA17Q96L03 361 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 CEP295NLQ96MC4 621 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 MSTO1Q9BUK6 570 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 RNF38Q9H0F5 515 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 GAREM1Q9H706 876 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 ZDHHC4Q9NPG8 344 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 TM7SF3Q9NS93 570 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 DDX43Q9NXZ2 648 aaKnown RBP5.13□□□□□ -1.59
ATXN3-232ENST00000555381 EHD2Q9NZN4 543 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 KCND2Q9NZV8 630 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 SIRPGQ9P1W8 387 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 LARSQ9P2J5 1176 aaKnown RBP5.13□□□□□ -1.59
ATXN3-232ENST00000555381 DEC1Q9P2X7 70 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 FBXL7Q9UJT9 491 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 GTF3C4Q9UKN8 822 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 PCDHA5Q9Y5H7 936 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 NPFFR2Q9Y5X5 522 aa5.13□□□□□ -1.59
ATXN3-232ENST00000555381 ASCC3Q8N3C0 2202 aaKnown RBP5.13□□□□□ -1.59
ATXN3-232ENST00000555381 URB1O60287 2271 aaKnown RBP5.13□□□□□ -1.59
ATXN3-232ENST00000555381 SMG1Q96Q15 3661 aaKnown RBP5.13□□□□□ -1.59
ATXN3-232ENST00000555381 SETXQ7Z333 2677 aaKnown RBP5.12□□□□□ -1.59
ATXN3-232ENST00000555381 E2F8A0AVK6 867 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 FAM149AA5PLN7 773 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 HNRNPDLO14979 420 aaKnown RBP5.12□□□□□ -1.59
ATXN3-232ENST00000555381 BCAT2O15382 392 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-232ENST00000555381 ARHGAP6O43182 974 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 TULP3O75386 442 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 OLFM2O95897 454 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 PIGRP01833 764 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 CDK4P11802 303 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 JUPP14923 745 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 PCSK1P29120 753 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 OXTRP30559 389 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 ABCD1P33897 745 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 MATKP42679 507 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 WASP42768 502 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 TRAPPC10P48553 1259 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 LHX1P48742 406 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 NCKAP1LP55160 1127 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 PRR5P85299 388 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 KDSRQ06136 332 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 MAP4K2Q12851 820 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 ANKRD1Q15327 319 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 TTC38Q5R3I4 469 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 LY6G5CQ5SRR4 150 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 C10orf76Q5T2E6 689 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 YOD1Q5VVQ6 348 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-232ENST00000555381 SLFN12LQ6IEE8 588 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 FAM171BQ6P995 826 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 VSTM1Q6UX27 236 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 C4orf50Q6ZRC1 276 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 DENND5BQ6ZUT9 1274 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 IGDCC3Q8IVU1 814 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 PPIL6Q8IXY8 311 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 CHPFQ8IZ52 775 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 TMEM86AQ8N2M4 240 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 PDCL2Q8N4E4 241 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 IGSF22Q8N9C0 903 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 SYT2Q8N9I0 419 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-232ENST00000555381 SYT8Q8NBV8 401 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 MZB1Q8WU39 189 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 WBP1Q96G27 269 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 ZNF560Q96MR9 790 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 PKMYT1Q99640 499 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 SPATA9Q9BWV2 254 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 FOXP1Q9H334 677 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-232ENST00000555381 CLMPQ9H6B4 373 aa5.12□□□□□ -1.59
ATXN3-232ENST00000555381 IL21RQ9HBE5 538 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms