RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 NFKBIEO00221 500 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 ZBTB24O43167 697 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 GRID2O43424 1007 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 GLDCP23378 1020 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 GRK2P25098 689 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 ARL4AP40617 200 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 GJA9P57773 515 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 RBP5P82980 135 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 IFRD2Q12894 506 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 CTBP1Q13363 440 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 ZNF423Q2M1K9 1284 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 BNC2Q6ZN30 1099 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 SLC41A1Q8IVJ1 513 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 DENND6AQ8IWF6 608 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 RNF139Q8WU17 664 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 RPL10LQ96L21 214 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 FTHL17Q9BXU8 183 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 FRMD8Q9BZ67 464 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 FAM49AQ9H0Q0 323 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 PAPPA2Q9BXP8 1791 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 ZCWPW2A0A1B0GU75 182 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 C7orf72A4D263 438 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 DPYSL4O14531 572 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 POLBP06746 335 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 SLC5A2P31639 672 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 ETFBP38117 255 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 MPP1Q00013 466 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 ADGRE1Q14246 886 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 PPP1R3AQ16821 1122 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 RNF135Q8IUD6 432 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 MYO1HQ8N1T3 1032 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 KYQ8NBH2 561 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 JADE3Q92613 823 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 ACE2Q9BYF1 805 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 SENP6Q9GZR1 1112 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 ATXN3LQ9H3M9 355 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 WDR41Q9HAD4 459 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 CYP3A43Q9HB55 503 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 CDHR5Q9HBB8 845 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 SFMBT1Q9UHJ3 866 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 VANGL2Q9ULK5 521 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 DOCK1Q14185 1865 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 TRIM13O60858 407 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 ALOX15P16050 662 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 UGT1A6P19224 532 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 EDNRBP24530 442 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 NME5P56597 212 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 ZBTB17Q13105 803 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 VGLL4Q14135 290 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 LBX2Q6XYB7 198 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 OTOP3Q7RTS5 596 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 ARHGAP18Q8N392 663 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 KBTBD7Q8WVZ9 684 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 VPS39Q96JC1 886 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 KCNK16Q96T55 309 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 RTKNQ9BST9 563 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 SPON1Q9HCB6 807 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 PIGVQ9NUD9 493 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 MORF4L1Q9UBU8 362 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 STK39Q9UEW8 545 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 SORCS3Q9UPU3 1222 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 M0QYT0 321 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 CASQ2O14958 399 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 AURKAO14965 403 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 TSPAN1O60635 241 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 TFEBP19484 476 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 CYLC2Q14093 348 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 PIGGQ5H8A4 983 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 DCAF15Q66K64 600 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 NT5DC4Q86YG4 428 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 MFSD6LQ8IWD5 586 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 OR9I1Q8NGQ6 314 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 SPATA22Q8NHS9 363 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 DIS3LQ8TF46 1054 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 LRTOMTQ8WZ04 291 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 KCNN1Q92952 543 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 FERMT1Q9BQL6 677 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 C11orf84Q9BUA3 381 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 MLPHQ9BV36 600 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 NXF3Q9H4D5 531 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 ATXN10Q9UBB4 475 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 CDY2AQ9Y6F7 541 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 CDY1Q9Y6F8 540 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 ATP6AP2A0A1C7CYW4 349 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 MATN2O00339 956 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 ATP6AP2O75787 350 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 GABRB3P28472 473 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 CD68P34810 354 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 LIMK2P53671 638 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 ZNF280AP59817 542 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 YBX1P67809 324 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 DGKDQ16760 1214 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 CEP97Q8IW35 865 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 LSMEM2Q8N112 164 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 ACMSDQ8TDX5 336 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 LENG1Q96BZ8 264 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 OTUD5Q96G74 571 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 FAM167AQ96KS9 214 aa10.55□□□□□ -0.72
CDC42SE1-207ENST00000540998 CAMKK2Q96RR4 588 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms