RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 FTH1P19P0C7X4 201 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 STAT1P42224 750 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 CTSKP43235 329 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 METAP1P53582 386 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 C21orf59P57076 290 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 SYCP1Q15431 976 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 TRIM72Q6ZMU5 477 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 TFAP2DQ7Z6R9 452 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 GLRX5Q86SX6 157 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 SETD3Q86TU7 594 aaPredicted RBP22.78■■□□□ 1.24
SCARB1-206ENST00000539320 FAM131BQ86XD5 332 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 GATA6Q92908 595 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 FAM131CQ96AQ9 280 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 C1orf74Q96LT6 269 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 C11orf70Q9BRQ4 267 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 ACE2Q9BYF1 805 aaPredicted RBP22.78■■□□□ 1.24
SCARB1-206ENST00000539320 MPP6Q9NZW5 540 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 VPS51Q9UID3 782 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 FRYQ5TBA9 3013 aa22.78■■□□□ 1.24
SCARB1-206ENST00000539320 IGLV3-10A0A075B6K4 115 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 VILLO15195 856 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 SLC7A4O43246 635 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 SNAP91O60641 907 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 SRCP12931 536 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 ZNF18P17022 549 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 CHRNB2P17787 502 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 MMP8P22894 467 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 SUZ12Q15022 739 aaKnown RBP22.77■■□□□ 1.24
SCARB1-206ENST00000539320 C6orf118Q5T5N4 469 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 RAB44Q7Z6P3 723 aaPredicted RBP22.77■■□□□ 1.24
SCARB1-206ENST00000539320 CHCHD4Q8N4Q1 142 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 EMC1Q8N766 993 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 BAHD1Q8TBE0 780 aaPredicted RBP22.77■■□□□ 1.24
SCARB1-206ENST00000539320 PCMTD1Q96MG8 357 aaPredicted RBP22.77■■□□□ 1.24
SCARB1-206ENST00000539320 HAPLN3Q96S86 360 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 EBF2Q9HAK2 575 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 AASDHPPTQ9NRN7 309 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 LIMA1Q9UHB6 759 aaKnown RBP22.77■■□□□ 1.24
SCARB1-206ENST00000539320 SARDHQ9UL12 918 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 MSRB2Q9Y3D2 182 aa22.77■■□□□ 1.24
SCARB1-206ENST00000539320 TP53BP1Q12888 1972 aaPredicted RBP22.77■■□□□ 1.24
SCARB1-206ENST00000539320 H0Y8X5 98 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 PLK4O00444 970 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 BNIP3LO60238 219 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 PPP2CBP62714 309 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 PPP2CAP67775 309 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 ATP11AP98196 1134 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 KCNT1Q5JUK3 1230 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.76■■□□□ 1.23
SCARB1-206ENST00000539320 DBX2Q6ZNG2 339 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 PIP4K2CQ8TBX8 421 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 ADAMTS14Q8WXS8 1223 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 SKA1Q96BD8 255 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 CCDC114Q96M63 670 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 PPM1HQ9ULR3 514 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 APOBEC2Q9Y235 224 aaKnown RBP22.76■■□□□ 1.23
SCARB1-206ENST00000539320 DOCK4Q8N1I0 1966 aa22.76■■□□□ 1.23
SCARB1-206ENST00000539320 TMEM8BA6NDV4 472 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 MCF2LO15068 1137 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 MBD3O95983 291 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 MT-CO1P00395 513 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 OR1E1P30953 314 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 CLCN6P51797 869 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 POM121L1PQ3SYA9 428 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 CCDC183Q5T5S1 534 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 AGBL4Q5VU57 503 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 ATP11CQ8NB49 1132 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 NEK11Q8NG66 645 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 RHBDD1Q8TEB9 315 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 CDC6Q99741 560 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 BTBD3Q9Y2F9 522 aa22.75■■□□□ 1.23
SCARB1-206ENST00000539320 TBC1D3DA0A087WVF3 549 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 TBC1D3IA0A087WXS9 549 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 TBC1D3EA0A087X179 549 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 TBC1D3KA0A087X1G2 549 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 A0A0D9SEW6 157 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 TBC1D3FA6NER0 549 aaPredicted RBP22.74■■□□□ 1.23
SCARB1-206ENST00000539320 TBC1D3LB9A6J9 549 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 KCNK3O14649 394 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 LATO43561 262 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 PLRG1O43660 514 aaKnown RBP22.74■■□□□ 1.23
SCARB1-206ENST00000539320 PCDHGA12O60330 932 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 SRGAP2O75044 1071 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 RTN2O75298 545 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 WNT1P04628 370 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 TBC1D3HP0C7X1 549 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 RRM1P23921 792 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 SDC4P31431 198 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 GRK6P43250 576 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 CNTN1Q12860 1018 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 CDO1Q16878 200 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 ARTNQ5T4W7 220 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 TBC1D3GQ6DHY5 549 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 TBC1D3CQ6IPX1 549 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 PHLDB2Q86SQ0 1253 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 TBC1D3Q8IZP1 549 aaPredicted RBP22.74■■□□□ 1.23
SCARB1-206ENST00000539320 OR7D4Q8NG98 312 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 SLC30A5Q8TAD4 765 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 RXFP2Q8WXD0 754 aa22.74■■□□□ 1.23
SCARB1-206ENST00000539320 SERAC1Q96JX3 654 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms