RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 KRT9P35527 623 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 RXRGP48443 463 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 CDH4P55283 916 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 CYP4F3Q08477 520 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 CNTN1Q12860 1018 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 COL9A2Q14055 689 aaPredicted RBP17.17■□□□□ 0.34
PTPN6-210ENST00000538318 CAMK4Q16566 473 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 AGBL4Q5VU57 503 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 OTUD1Q5VV17 481 aaPredicted RBP17.17■□□□□ 0.34
PTPN6-210ENST00000538318 SLC47A2Q86VL8 602 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 IQCHQ86VS3 1027 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 TRIM69Q86WT6 500 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 ZDHHC17Q8IUH5 632 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 OXR1Q8N573 874 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 SH2D3CQ8N5H7 860 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 SCUBE2Q9NQ36 999 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 RRN3Q9NYV6 651 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 VPS28Q9UK41 221 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 DNAJC12Q9UKB3 198 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 DMTF1Q9Y222 760 aa17.17■□□□□ 0.34
PTPN6-210ENST00000538318 C1QTNF3-AMACRE9PGA6 284 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 CBX4O00257 560 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 GGCXP38435 758 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 MTIF2P46199 727 aaKnown RBP17.16■□□□□ 0.34
PTPN6-210ENST00000538318 CXCR3P49682 368 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 OVGP1Q12889 678 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 DNAJC3Q13217 504 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 COL28A1Q2UY09 1125 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 SFMBT2Q5VUG0 894 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 Q6ZVU0 165 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 SPATS2Q86XZ4 545 aaKnown RBP17.16■□□□□ 0.34
PTPN6-210ENST00000538318 EID2Q8N6I1 236 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 MLKLQ8NB16 471 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 PIP4K2CQ8TBX8 421 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 NT5C3BQ969T7 300 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 NPY6RQ99463 290 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 SIK2Q9H0K1 926 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 WDCPQ9H6R7 721 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 SYNCQ9H7C4 482 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 PIGVQ9NUD9 493 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 ARHGEF38Q9NXL2 777 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 HS3ST2Q9Y278 367 aa17.16■□□□□ 0.34
PTPN6-210ENST00000538318 SMG1Q96Q15 3661 aaKnown RBP17.16■□□□□ 0.34
PTPN6-210ENST00000538318 LOC400499M0QZD8 3231 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 I6L893 689 aaPredicted RBP17.15■□□□□ 0.34
PTPN6-210ENST00000538318 MAGEC1O60732 1142 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 RFPL3O75679 317 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 CNTN5O94779 1100 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 ADCY5O95622 1261 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 SRCP12931 536 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 ZNF18P17022 549 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 MAT2AP31153 395 aaKnown RBP17.15■□□□□ 0.34
PTPN6-210ENST00000538318 ACADVLP49748 655 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 UBE2HP62256 183 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 KRT83P78385 493 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 BNIP3Q12983 259 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 BRMS1LQ5PSV4 323 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 DPY19L2P1Q6NXN4 242 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 KANSL1Q7Z3B3 1105 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 PDZD3Q86UT5 571 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 FAM71AQ8IYT1 594 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 ZNF683Q8IZ20 524 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 HNRNPLLQ8WVV9 542 aaKnown RBP17.15■□□□□ 0.34
PTPN6-210ENST00000538318 TSC1Q92574 1164 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 PGAP3Q96FM1 320 aaPredicted RBP17.15■□□□□ 0.34
PTPN6-210ENST00000538318 TKTL2Q9H0I9 626 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 MUC3BQ9H195 1237 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 PLCB1Q9NQ66 1216 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 ANLNQ9NQW6 1124 aa17.15■□□□□ 0.34
PTPN6-210ENST00000538318 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.15■□□□□ 0.34
PTPN6-210ENST00000538318 FASNP49327 2511 aaKnown RBP17.15■□□□□ 0.34
PTPN6-210ENST00000538318 IGSF10Q6WRI0 2623 aa17.14■□□□□ 0.33
PTPN6-210ENST00000538318 MT-CO1P00395 513 aa17.14■□□□□ 0.33
PTPN6-210ENST00000538318 PNMA6AP0CW24 399 aaPredicted RBP17.14■□□□□ 0.33
PTPN6-210ENST00000538318 TFE3P19532 575 aaPredicted RBP17.14■□□□□ 0.33
PTPN6-210ENST00000538318 CDH5P33151 784 aaPredicted RBP17.14■□□□□ 0.33
PTPN6-210ENST00000538318 HNF1BP35680 557 aa17.14■□□□□ 0.33
PTPN6-210ENST00000538318 TAS2R38P59533 333 aa17.14■□□□□ 0.33
PTPN6-210ENST00000538318 BPIFB4P59827 614 aa17.14■□□□□ 0.33
PTPN6-210ENST00000538318 STAT4Q14765 748 aa17.14■□□□□ 0.33
PTPN6-210ENST00000538318 MAN2A1Q16706 1144 aa17.14■□□□□ 0.33
PTPN6-210ENST00000538318 POM121L1PQ3SYA9 428 aa17.14■□□□□ 0.33
PTPN6-210ENST00000538318 SETMARQ53H47 684 aaPredicted RBP17.14■□□□□ 0.33
PTPN6-210ENST00000538318 ALFQ53S48 1182 aa17.14■□□□□ 0.33
PTPN6-210ENST00000538318 SETD3Q86TU7 594 aaPredicted RBP17.14■□□□□ 0.33
PTPN6-210ENST00000538318 PSMB7Q99436 277 aa17.14■□□□□ 0.33
PTPN6-210ENST00000538318 C2orf49Q9BVC5 232 aaPredicted RBP17.14■□□□□ 0.33
PTPN6-210ENST00000538318 PREBQ9HCU5 417 aa17.14■□□□□ 0.33
PTPN6-210ENST00000538318 TMEM51Q9NW97 253 aa17.14■□□□□ 0.33
PTPN6-210ENST00000538318 STAP1Q9ULZ2 295 aa17.14■□□□□ 0.33
PTPN6-210ENST00000538318 A0A087WV48 116 aa17.13■□□□□ 0.33
PTPN6-210ENST00000538318 DRGXA6NNA5 263 aa17.13■□□□□ 0.33
PTPN6-210ENST00000538318 PRAMEF26H0Y7S4 382 aa17.13■□□□□ 0.33
PTPN6-210ENST00000538318 SNAP91O60641 907 aa17.13■□□□□ 0.33
PTPN6-210ENST00000538318 RNGTTO60942 597 aaKnown RBP17.13■□□□□ 0.33
PTPN6-210ENST00000538318 F9P00740 461 aa17.13■□□□□ 0.33
PTPN6-210ENST00000538318 CTSLP07711 333 aa17.13■□□□□ 0.33
PTPN6-210ENST00000538318 JUPP14923 745 aa17.13■□□□□ 0.33
PTPN6-210ENST00000538318 SCNN1AP37088 669 aa17.13■□□□□ 0.33
PTPN6-210ENST00000538318 GABRB2P47870 512 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms