RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 SNX19Q92543 992 aa8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 FAM131CQ96AQ9 280 aa8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 SKA1Q96BD8 255 aa8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 FCRL2Q96LA5 508 aaPredicted RBP8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 MRGPRX3Q96LB0 322 aa8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 PRICKLE1Q96MT3 831 aaPredicted RBP8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 CEP63Q96MT8 703 aa8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 TIGD1Q96MW7 591 aa8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 NT5C1BQ96P26 610 aa8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 TRIM62Q9BVG3 475 aa8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 INTS6Q9UL03 887 aaKnown RBP8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 CNTN6Q9UQ52 1028 aa8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 BTBD3Q9Y2F9 522 aa8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 SLCO1B1Q9Y6L6 691 aa8.66□□□□□ -1.02
DEPDC1-205ENST00000525124 CELSR3Q9NYQ7 3312 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 A0A087WV48 116 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 EDDM13A0A1B0GTR0 161 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 LRRC72A6NJI9 287 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 H0Y8X5 98 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 LUC7L3O95232 432 aaKnown RBP8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 SMC2O95347 1197 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 MOCS3O95396 460 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 FYNP06241 537 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 FAM157BP0CG42 384 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 NUDT1P36639 197 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 PMS1P54277 932 aaKnown RBP8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 GALCP54803 685 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 VAC14Q08AM6 782 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 CETN1Q12798 172 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 EIF4EBP2Q13542 120 aaPredicted RBP8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 CST6Q15828 149 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 MS4A13Q5J8X5 152 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 C9orf64Q5T6V5 341 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 NADSYN1Q6IA69 706 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 RFWD3Q6PCD5 774 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 PDZD3Q86UT5 571 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 TMPRSS12Q86WS5 348 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 CACUL1Q86Y37 369 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 CACTIN-AS1Q8N1I8 211 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 OXR1Q8N573 874 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 ZNF366Q8N895 744 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 OR2T34Q8NGX1 318 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 MDM1Q8TC05 714 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 STK32AQ8WU08 396 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 DHTKD1Q96HY7 919 aaPredicted RBP8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 ELF4Q99607 663 aaPredicted RBP8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 ZSWIM1Q9BR11 485 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 ACE2Q9BYF1 805 aaPredicted RBP8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 ERVMER34-1Q9H9K5 563 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 FBXL12Q9NXK8 326 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 ERVW-1Q9UQF0 538 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 BPTFQ12830 3046 aa8.65□□□□□ -1.02
DEPDC1-205ENST00000525124 ZFYVE26Q68DK2 2539 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 SMG1Q96Q15 3661 aaKnown RBP8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 URB1O60287 2271 aaKnown RBP8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 KNTC1P50748 2209 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 IGSF10Q6WRI0 2623 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 GOLGA6L7A0A1B0GV03 622 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 A0A1W2PR77 199 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 A6NJY4 79 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 M0QYV0 167 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 CDK2AP1O14519 115 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 PSMA7O14818 248 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 LATO43561 262 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 SIN3BO75182 1162 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 FSBPO95073 299 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 IGLV3-25P01717 112 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 C5AR1P21730 350 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 CD38P28907 300 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 CSKP41240 450 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 GPD2P43304 727 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 GATA4P43694 442 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 RXRGP48443 463 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 RGS7P49802 495 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 PLK1P53350 603 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 ECT2LQ008S8 904 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 MTA1Q13330 715 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 STIM1Q13586 685 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 COL28A1Q2UY09 1125 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 PITRM1Q5JRX3 1037 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 KCNT1Q5JUK3 1230 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 SND1Q7KZF4 910 aaKnown RBP eCLIP8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 ADAT2Q7Z6V5 191 aaKnown RBP8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 CCDC117Q8IWD4 279 aaPredicted RBP8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 PPM1KQ8N3J5 372 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 DQX1Q8TE96 717 aaKnown RBP8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 CLEC4CQ8WTT0 213 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 SMARCE1Q969G3 411 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 BTN2A3PQ96KV6 586 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 FAM129BQ96TA1 746 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 EBF2Q9HAK2 575 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 ZDHHC3Q9NYG2 299 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 FTSJ1Q9UET6 329 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 HOOK1Q9UJC3 728 aaKnown RBP8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 PCDHB4Q9Y5E5 795 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 ATRXP46100 2492 aa8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 COL27A1Q8IZC6 1860 aaPredicted RBP8.64□□□□□ -1.03
DEPDC1-205ENST00000525124 TRPM6Q9BX84 2022 aa8.63□□□□□ -1.03
DEPDC1-205ENST00000525124 TRIM49BA6NDI0 452 aa8.63□□□□□ -1.03
DEPDC1-205ENST00000525124 TRABD2BA6NFA1 517 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms