RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ZNF419Q96HQ0 510 aaPredicted RBP21.15■□□□□ 0.98
TRIM35-203ENST00000521253 PABPC3Q9H361 631 aaKnown RBP21.15■□□□□ 0.98
TRIM35-203ENST00000521253 ATP13A1Q9HD20 1204 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 ABHD10Q9NUJ1 306 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 GPATCH2LQ9NWQ4 482 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 DNAI1Q9UI46 699 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 CBX4O00257 560 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 CREB3O43889 395 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 GDF9O60383 454 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 MFAP3LO75121 409 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 RNF8O76064 485 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 SRCP12931 536 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 EPHB2P29323 1055 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 ACVRL1P37023 503 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 ADKP55263 362 aaKnown RBP21.14■□□□□ 0.97
TRIM35-203ENST00000521253 GFPT1Q06210 699 aaPredicted RBP21.14■□□□□ 0.97
TRIM35-203ENST00000521253 SEMA3BQ13214 749 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 ELAVL3Q14576 367 aaKnown RBP21.14■□□□□ 0.97
TRIM35-203ENST00000521253 CST6Q15828 149 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 TTC31Q49AM3 519 aaPredicted RBP21.14■□□□□ 0.97
TRIM35-203ENST00000521253 C12orf50Q8NA57 414 aaPredicted RBP21.14■□□□□ 0.97
TRIM35-203ENST00000521253 ATP11CQ8NB49 1132 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 RMDN1Q96DB5 314 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 PEBP4Q96S96 227 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 EPAS1Q99814 870 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 TRIM5Q9C035 493 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 RBSNQ9H1K0 784 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 RXFP3Q9NSD7 469 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 PCSK1NQ9UHG2 260 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 PILRBQ9UKJ0 227 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 SCML1Q9UN30 329 aa21.14■□□□□ 0.97
TRIM35-203ENST00000521253 PATE3B3GLJ2 98 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 K7ERQ8 282 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 MID1O15344 667 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 ZMPSTE24O75844 475 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 CYP1A2P05177 515 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 MIPP30301 263 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 ACSL1P33121 698 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 PSMD8P48556 350 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 RSPO4Q2I0M5 234 aaPredicted RBP21.13■□□□□ 0.97
TRIM35-203ENST00000521253 ASTE1Q2TB18 679 aaPredicted RBP21.13■□□□□ 0.97
TRIM35-203ENST00000521253 AASDHQ4L235 1098 aaPredicted RBP21.13■□□□□ 0.97
TRIM35-203ENST00000521253 PEAR1Q5VY43 1037 aaPredicted RBP21.13■□□□□ 0.97
TRIM35-203ENST00000521253 Q6ZVU0 165 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 CADM4Q8NFZ8 388 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 FOXJ1Q92949 421 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 ARHGEF26Q96DR7 871 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 NUP85Q9BW27 656 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 ACE2Q9BYF1 805 aaPredicted RBP21.13■□□□□ 0.97
TRIM35-203ENST00000521253 ZNHIT6Q9NWK9 470 aaKnown RBP21.13■□□□□ 0.97
TRIM35-203ENST00000521253 AP4E1Q9UPM8 1137 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 DOCK4Q8N1I0 1966 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 DNAH14Q0VDD8 3507 aa21.13■□□□□ 0.97
TRIM35-203ENST00000521253 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.12■□□□□ 0.97
TRIM35-203ENST00000521253 SSU72P8A0A1W2PR75 194 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 SMAD6O43541 496 aaKnown RBP21.12■□□□□ 0.97
TRIM35-203ENST00000521253 PRPSAP2O60256 369 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 LRCH4O75427 683 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 SLC8A1P32418 973 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 GALCP54803 685 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 ARF5P84085 180 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 TBX2Q13207 712 aaPredicted RBP21.12■□□□□ 0.97
TRIM35-203ENST00000521253 MAPK8IP2Q13387 824 aaPredicted RBP21.12■□□□□ 0.97
TRIM35-203ENST00000521253 SLC18A3Q16572 532 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 CA9Q16790 459 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 TSR1Q2NL82 804 aaKnown RBP21.12■□□□□ 0.97
TRIM35-203ENST00000521253 ERMARDQ5T6L9 678 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 DAB2IPQ5VWQ8 1189 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 IL31Q6EBC2 164 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 RETSATQ6NUM9 610 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 CYP4V2Q6ZWL3 525 aaPredicted RBP21.12■□□□□ 0.97
TRIM35-203ENST00000521253 USP30Q70CQ3 517 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 RTL3Q8N8U3 475 aaKnown RBP21.12■□□□□ 0.97
TRIM35-203ENST00000521253 GANCQ8TET4 914 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 ARHGEF2Q92974 986 aaKnown RBP21.12■□□□□ 0.97
TRIM35-203ENST00000521253 SNRNP25Q9BV90 132 aaKnown RBP21.12■□□□□ 0.97
TRIM35-203ENST00000521253 BTBD1Q9H0C5 482 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 FBXL12Q9NXK8 326 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 SERGEFQ9UGK8 458 aa21.12■□□□□ 0.97
TRIM35-203ENST00000521253 RALGAPA1Q6GYQ0 2036 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 A0A1W2PP55 124 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 KHNYNO15037 678 aaKnown RBP21.11■□□□□ 0.97
TRIM35-203ENST00000521253 RAMP2O60895 175 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 IL1BP01584 269 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 HOXD12P35452 270 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 PCK1P35558 622 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 ETFBP38117 255 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 DPP6P42658 865 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 ID4P47928 161 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 CLCN6P51797 869 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 SYCP2LQ5T4T6 812 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 OR8D1Q8WZ84 308 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 BTBD6Q96KE9 485 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 CHP1Q99653 195 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 MAGEH1Q9H213 219 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 DEF6Q9H4E7 631 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 DHX35Q9H5Z1 703 aaKnown RBP21.11■□□□□ 0.97
TRIM35-203ENST00000521253 NOL6Q9H6R4 1146 aaKnown RBP21.11■□□□□ 0.97
TRIM35-203ENST00000521253 ANAPC7Q9UJX3 599 aa21.11■□□□□ 0.97
TRIM35-203ENST00000521253 NCKAP1Q9Y2A7 1128 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms