RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 TLR8Q9NR97 1041 aaKnown RBP10.35□□□□□ -0.75
MCF2-209ENST00000520602 A0A0U1RQF3 1178 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 F5H5T6 163 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 TRIM13O60858 407 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 AP2A1O95782 977 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 MT-CO1P00395 513 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 PIRTP0C851 137 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 DNAJB2P25686 324 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 SCNN1AP37088 669 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 CD86P42081 329 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 CASP2P42575 452 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 STX1BP61266 288 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 POLD3Q15054 466 aaPredicted RBP10.34□□□□□ -0.75
MCF2-209ENST00000520602 C17orf99Q6UX52 265 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 SLC24A5Q71RS6 500 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 TAS2R42Q7RTR8 314 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 TTC7BQ86TV6 843 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 KCTD13Q8WZ19 329 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 SLC9A7Q96T83 725 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 OMDQ99983 421 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 DNAJC6O75061 913 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 TBX18O95935 607 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 ENO3P13929 434 aaPredicted RBP10.34□□□□□ -0.75
MCF2-209ENST00000520602 GFAPP14136 432 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 SCNN1BP51168 640 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 TWF1Q12792 350 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 VEPH1Q14D04 833 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 GRAMD1BQ3KR37 738 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 HABP4Q5JVS0 413 aaKnown RBP10.34□□□□□ -0.75
MCF2-209ENST00000520602 PDPK2PQ6A1A2 396 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 CDHR3Q6ZTQ4 885 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 SAPCD2Q86UD0 394 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 SLC41A1Q8IVJ1 513 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 SEPT8Q92599 483 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 PHF21BQ96EK2 531 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 PNPOQ9NVS9 261 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 GMIPQ9P107 970 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 FETUBQ9UGM5 382 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 ANGPTL2Q9UKU9 493 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 TSPAN3O60637 253 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 C2P06681 752 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 GCAP28676 217 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 COPAP53621 1224 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 GSCP56915 257 aaPredicted RBP10.34□□□□□ -0.75
MCF2-209ENST00000520602 USP4Q13107 963 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 DUSP4Q13115 394 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 KIF19Q2TAC6 998 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 LGI2Q8N0V4 545 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 C3orf58Q8NDZ4 430 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 CD99L2Q8TCZ2 262 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 CALML6Q8TD86 181 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 KCNK4Q9NYG8 393 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 ZNF180Q9UJW8 692 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 PSAT1Q9Y617 370 aa10.34□□□□□ -0.75
MCF2-209ENST00000520602 CCDC160A6NGH7 325 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 CBX4O00257 560 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 DCXO43602 365 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 RASSF9O75901 435 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 CRHR1P34998 444 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 AIF1P55008 147 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 TAF10Q12962 218 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 BFSP2Q13515 415 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 UBAP2LQ14157 1087 aaKnown RBP10.33□□□□□ -0.76
MCF2-209ENST00000520602 FAM83EQ2M2I3 478 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 DNAL1Q4LDG9 190 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 PKDCCQ504Y2 493 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 PCID2Q5JVF3 399 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 RABGAP1LQ5R372 815 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 NEPROQ6NW34 567 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 MON1AQ86VX9 555 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 CFAP52Q8N1V2 620 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 TDRD5Q8NAT2 981 aaKnown RBP10.33□□□□□ -0.76
MCF2-209ENST00000520602 KHSRPQ92945 711 aaKnown RBP eCLIP10.33□□□□□ -0.76
MCF2-209ENST00000520602 UROC1Q96N76 676 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 NDNQ99608 321 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 UBE2OQ9C0C9 1292 aaKnown RBP10.33□□□□□ -0.76
MCF2-209ENST00000520602 PHACTR1Q9C0D0 580 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 GPAMQ9HCL2 828 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 PRDM5Q9NQX1 630 aaPredicted RBP10.33□□□□□ -0.76
MCF2-209ENST00000520602 SAR1AQ9NR31 198 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 ADA2Q9NZK5 511 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 TMEM216Q9P0N5 145 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 SLC12A4Q9UP95 1085 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 CRYL1Q9Y2S2 319 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 ATAD5Q96QE3 1844 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 NMBRP28336 390 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 CYP2C18P33260 490 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 CD151P48509 253 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 GJA9P57773 515 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 KCTD4Q8WVF5 259 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 CMTM5Q96DZ9 223 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 GLOD4Q9HC38 313 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 SSU72Q9NP77 194 aaKnown RBP10.33□□□□□ -0.76
MCF2-209ENST00000520602 TAGLN3Q9UI15 199 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 F8W810 466 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 CCL22O00626 93 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 FGF10O15520 208 aaPredicted RBP10.33□□□□□ -0.76
MCF2-209ENST00000520602 SUPT7LO94864 414 aa10.33□□□□□ -0.76
MCF2-209ENST00000520602 TCN1P20061 433 aaPredicted RBP10.33□□□□□ -0.76
MCF2-209ENST00000520602 GMPRP36959 345 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms