RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 CCDC114Q96M63 670 aa13.1□□□□□ -0.31
CLCN3-210ENST00000515420 HSPA12BQ96MM6 686 aa13.1□□□□□ -0.31
CLCN3-210ENST00000515420 DNAJC7Q99615 494 aa13.1□□□□□ -0.31
CLCN3-210ENST00000515420 EPAS1Q99814 870 aa13.1□□□□□ -0.31
CLCN3-210ENST00000515420 PABPC3Q9H361 631 aaKnown RBP13.1□□□□□ -0.31
CLCN3-210ENST00000515420 SGK2Q9HBY8 427 aa13.1□□□□□ -0.31
CLCN3-210ENST00000515420 DONSONQ9NYP3 566 aa13.1□□□□□ -0.31
CLCN3-210ENST00000515420 VPS51Q9UID3 782 aa13.1□□□□□ -0.31
CLCN3-210ENST00000515420 FZD4Q9ULV1 537 aa13.1□□□□□ -0.31
CLCN3-210ENST00000515420 FZD10Q9ULW2 581 aa13.1□□□□□ -0.31
CLCN3-210ENST00000515420 NUMA1Q14980 2115 aa13.1□□□□□ -0.31
CLCN3-210ENST00000515420 A0A0D9SEW6 157 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 FAM72CH0Y354 149 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 SLC30A4O14863 429 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 ATMINO43313 823 aaPredicted RBP13.09□□□□□ -0.31
CLCN3-210ENST00000515420 RNF8O76064 485 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 TPM1P09493 284 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 SRCP12931 536 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 ITPKAP23677 461 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 PSMA2P25787 234 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 ZNF135P52742 658 aaPredicted RBP13.09□□□□□ -0.31
CLCN3-210ENST00000515420 OGDHQ02218 1023 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 GNA12Q03113 381 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 SEMA3BQ13214 749 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 DLG2Q15700 870 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 CCDC6Q16204 474 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 FAM72AQ5TYM5 149 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 FAM72DQ6L9T8 149 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 RETSATQ6NUM9 610 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 SCYL2Q6P3W7 929 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 SARM1Q6SZW1 724 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 ARMCX6Q7L4S7 300 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 ERMP1Q7Z2K6 904 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 FAM72BQ86X60 149 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 PSTKQ8IV42 348 aaKnown RBP13.09□□□□□ -0.31
CLCN3-210ENST00000515420 VSTM4Q8IW00 320 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 OR8K1Q8NGG5 319 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 OR8D1Q8WZ84 308 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 FAM129BQ96TA1 746 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 GPR174Q9BXC1 333 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 NUSAP1Q9BXS6 441 aaKnown RBP13.09□□□□□ -0.31
CLCN3-210ENST00000515420 BTBD1Q9H0C5 482 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 MAGEH1Q9H213 219 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 MTG2Q9H4K7 406 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 ARHGAP20Q9P2F6 1191 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 TPX2Q9ULW0 747 aaKnown RBP13.09□□□□□ -0.31
CLCN3-210ENST00000515420 NCKAP1Q9Y2A7 1128 aa13.09□□□□□ -0.31
CLCN3-210ENST00000515420 A0A087X0T9 212 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.08□□□□□ -0.32
CLCN3-210ENST00000515420 SSU72P8A0A1W2PR75 194 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 LNP1A1A4G5 178 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 METTL12A8MUP2 240 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 MEI4A8MW99 385 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 WASH4PA8MWX3 477 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 MCF2LO15068 1137 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 FGF10O15520 208 aaPredicted RBP13.08□□□□□ -0.32
CLCN3-210ENST00000515420 ZMPSTE24O75844 475 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 SERPINF2P08697 491 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 FAM228BP0C875 321 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 GNSP15586 552 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 C5AR1P21730 350 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 GEMIN4P57678 1058 aaKnown RBP13.08□□□□□ -0.32
CLCN3-210ENST00000515420 ZNF252P-AS1Q0IIN9 211 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 TRIM61Q5EBN2 209 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 FAM46CQ5VWP2 391 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 RWDD4Q6NW29 188 aaKnown RBP13.08□□□□□ -0.32
CLCN3-210ENST00000515420 ALKBH5Q6P6C2 394 aaKnown RBP13.08□□□□□ -0.32
CLCN3-210ENST00000515420 CACUL1Q86Y37 369 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
CLCN3-210ENST00000515420 STK40Q8N2I9 435 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 RTL3Q8N8U3 475 aaKnown RBP13.08□□□□□ -0.32
CLCN3-210ENST00000515420 RNF214Q8ND24 703 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 FAM131CQ96AQ9 280 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLCN3-210ENST00000515420 EDEM2Q9BV94 578 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 ACE2Q9BYF1 805 aaPredicted RBP13.08□□□□□ -0.32
CLCN3-210ENST00000515420 CEP44Q9C0F1 390 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 SMOC1Q9H4F8 434 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 CATSPERBQ9H7T0 1116 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 ATP13A1Q9HD20 1204 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 TMEM74BQ9NUR3 256 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
CLCN3-210ENST00000515420 PCDH15Q96QU1 1955 aa13.08□□□□□ -0.32
CLCN3-210ENST00000515420 C1QTNF3-AMACRE9PGA6 284 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 PRPSAP2O60256 369 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 GDF9O60383 454 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 SNAP91O60641 907 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 RAMP2O60895 175 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 SEMA4FO95754 770 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 GOT1P17174 413 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 EPHB2P29323 1055 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 SLC8A1P32418 973 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 ACSL1P33121 698 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 PCK1P35558 622 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 SERPINH1P50454 418 aaKnown RBP13.07□□□□□ -0.32
CLCN3-210ENST00000515420 YBEYP58557 167 aaPredicted RBP13.07□□□□□ -0.32
CLCN3-210ENST00000515420 PIGHQ14442 188 aaPredicted RBP13.07□□□□□ -0.32
CLCN3-210ENST00000515420 ACCSLQ4AC99 568 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 ERMARDQ5T6L9 678 aa13.07□□□□□ -0.32
CLCN3-210ENST00000515420 TCEAL6Q6IPX3 200 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms