RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 CNTN5O94779 1100 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 MT-CO1P00395 513 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 PNMA6AP0CW24 399 aaPredicted RBP11.68□□□□□ -0.54
SIL1-208ENST00000505945 TFE3P19532 575 aaPredicted RBP11.68□□□□□ -0.54
SIL1-208ENST00000505945 PON1P27169 355 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 KRT9P35527 623 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 ACADVLP49748 655 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
SIL1-208ENST00000505945 RNASE9P60153 205 aaKnown RBP11.68□□□□□ -0.54
SIL1-208ENST00000505945 SLC6A3Q01959 620 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 PTK2Q05397 1052 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 STAT4Q14765 748 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 CAMK4Q16566 473 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 EXOC3L4Q17RC7 722 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 AGBL4Q5VU57 503 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 IRF2BP1Q8IU81 584 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 SH2D3CQ8N5H7 860 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 TSC1Q92574 1164 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 KDM4CQ9H3R0 1056 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 SYNCQ9H7C4 482 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 PLCB1Q9NQ66 1216 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 ANLNQ9NQW6 1124 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 AJAP1Q9UKB5 411 aaPredicted RBP11.68□□□□□ -0.54
SIL1-208ENST00000505945 CA5BQ9Y2D0 317 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 GTF3C3Q9Y5Q9 886 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 LOC400499M0QZD8 3231 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 A0A087WV48 116 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 FAM170AA1A519 330 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 C1QTNF3-AMACRE9PGA6 284 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 I6L893 689 aaPredicted RBP11.67□□□□□ -0.54
SIL1-208ENST00000505945 K7ERQ8 282 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 FOXN3O00409 490 aaPredicted RBP11.67□□□□□ -0.54
SIL1-208ENST00000505945 SLC31A1O15431 190 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 SDC3O75056 442 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 CLDN11O75508 207 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 ADCY5O95622 1261 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 C1SP09871 688 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 SRCP12931 536 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 NOS2P35228 1153 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 CLCN1P35523 988 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 HNF1BP35680 557 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 TAS2R38P59533 333 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 TARDBPQ13148 414 aaKnown RBP eCLIP11.67□□□□□ -0.54
SIL1-208ENST00000505945 MTA1Q13330 715 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 C5orf22Q49AR2 442 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 PTPN20Q4JDL3 420 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 ALFQ53S48 1182 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 SFMBT2Q5VUG0 894 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 OTUD1Q5VV17 481 aaPredicted RBP11.67□□□□□ -0.54
SIL1-208ENST00000505945 SLC26A9Q7LBE3 791 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 KANSL1Q7Z3B3 1105 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 SLC47A2Q86VL8 602 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 IQCHQ86VS3 1027 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 TRIM69Q86WT6 500 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 OXR1Q8N573 874 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 KLK6Q92876 244 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 CRELD1Q96HD1 420 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 DCBLD2Q96PD2 775 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 NOX5Q96PH1 765 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 MUC3BQ9H195 1237 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 WDCPQ9H6R7 721 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 SIX2Q9NPC8 291 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 PIGVQ9NUD9 493 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 DNAJC12Q9UKB3 198 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 DMTF1Q9Y222 760 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 TBC1D30Q9Y2I9 924 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 SNX10Q9Y5X0 201 aa11.67□□□□□ -0.54
SIL1-208ENST00000505945 GTPBP10A4D1E9 387 aaKnown RBP11.66□□□□□ -0.54
SIL1-208ENST00000505945 E9PAM4 449 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 PRAMEF26H0Y7S4 382 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 ALOX15BO15296 676 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 SNAP91O60641 907 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 MAGEC1O60732 1142 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 DAB1O75553 588 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 CTSLP07711 333 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 CDK4P11802 303 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 PRLRP16471 622 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 CKMT2P17540 419 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 NUDT1P36639 197 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 MTIF2P46199 727 aaKnown RBP11.66□□□□□ -0.54
SIL1-208ENST00000505945 CXCR3P49682 368 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 CDH4P55283 916 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 SNX16P57768 344 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 KRT83P78385 493 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 SEMG2Q02383 582 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 OVGP1Q12889 678 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 SETMARQ53H47 684 aaPredicted RBP11.66□□□□□ -0.54
SIL1-208ENST00000505945 C6orf118Q5T5N4 469 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 HES3Q5TGS1 186 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 FBXL19Q6PCT2 694 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 ATP11CQ8NB49 1132 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 ZNF397Q8NF99 534 aaPredicted RBP11.66□□□□□ -0.54
SIL1-208ENST00000505945 OR2A12Q8NGT7 310 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 KLHDC7BQ96G42 594 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 BBC3Q96PG8 261 aaPredicted RBP11.66□□□□□ -0.54
SIL1-208ENST00000505945 PSMB7Q99436 277 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 NPY6RQ99463 290 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 MYOCQ99972 504 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 TKTL2Q9H0I9 626 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms