RNA–Protein interactions for RNA: ENST00000502705.5

PTPN20-213, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 854 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-213	ENST00000502705	TMCO5B	A8MYB1	307 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	ZNF487	B1APH4	448 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	NT5C1B-RDH14	C9J2C7	533 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	CES2	O00748	559 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	NCAM2	O15394	837 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	TEX28	O15482	410 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	PJA2	O43164	708 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	DAPK3	O43293	454 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	MTSS1	O43312	755 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	SUV39H1	O43463	412 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	PSTPIP1	O43586	416 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	TBC1D4	O60343	1298 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	DAB1	O75553	588 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	NEBL	O76041	1014 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	MTA2	O94776	668 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	STK10	O94804	968 aa	Known RBP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	CYP1A2	P05177	515 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	ITGB1	P05556	798 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	TUBB	P07437	444 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	MME	P08473	750 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	GOLGA6D	P0CG33	693 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	UNG	P13051	313 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	NCAM1	P13591	858 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	PDGFRA	P16234	1089 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	POU3F3	P20264	500 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	GPD1	P21695	349 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	BDNF	P23560	247 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	PSMA2	P25787	234 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	NFKBIA	P25963	317 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	CTNNA2	P26232	953 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	CASQ1	P31415	396 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	PCK1	P35558	622 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	ACTN2	P35609	894 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	MATK	P42679	507 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	GPD2	P43304	727 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	PTPN9	P43378	593 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	GUCY2F	P51841	1108 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	SLC5A3	P53794	718 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	GEMIN4	P57678	1058 aa	Known RBP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	YWHAG	P61981	247 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	FMO1	Q01740	532 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	DEUP1	Q05D60	604 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	TFDP2	Q14188	446 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	PDK2	Q15119	407 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	DUSP6	Q16828	381 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	SLC25A52	Q3SY17	297 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	HSF5	Q4G112	596 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	RTP2	Q5QGT7	225 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	RABGAP1L	Q5R372	815 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	HECTD3	Q5T447	861 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	PM20D1	Q6GTS8	502 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	C4orf22	Q6V702	233 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	CLEC20A	Q6ZU45	233 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	C16orf59	Q7L2K0	433 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	OTOP3	Q7RTS5	596 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	ZNF571	Q7Z3V5	609 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	PEX26	Q7Z412	305 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	NOP9	Q86U38	636 aa	Known RBP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	PIGZ	Q86VD9	579 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	LRRC49	Q8IUZ0	686 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	YAF2	Q8IY57	180 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	LZTR1	Q8N653	840 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	EFHB	Q8N7U6	833 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	NIPA2	Q8N8Q9	360 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	PHC3	Q8NDX5	983 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	ZSWIM2	Q8NEG5	633 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	NUP43	Q8NFH3	380 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	VN1R2	Q8NFZ6	395 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	CCHCR1	Q8TD31	782 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	NSMCE1	Q8WV22	266 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	SLC35F5	Q8WV83	523 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	GATAD2B	Q8WXI9	593 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	EAF1	Q96JC9	268 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	PBK	Q96KB5	322 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	PKNOX2	Q96KN3	472 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	FCRL2	Q96LA5	508 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	C11orf70	Q9BRQ4	267 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	TTLL2	Q9BWV7	592 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	BRD8	Q9H0E9	1235 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	ACBD3	Q9H3P7	528 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	SLITRK6	Q9H5Y7	841 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	CATSPERB	Q9H7T0	1116 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	FAM204A	Q9H8W3	233 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	WDR6	Q9NNW5	1121 aa	Known RBP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	OBP2A	Q9NY56	170 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	GOLGA6A	Q9NYA3	693 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	GDE1	Q9NZC3	331 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	ARHGAP20	Q9P2F6	1191 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	RCOR3	Q9P2K3	495 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	ANAPC7	Q9UJX3	599 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	FBXW11	Q9UKB1	542 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	SH3BP1	Q9Y3L3	701 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	YIPF1	Q9Y548	306 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705	RAD54B	Q9Y620	910 aa		4.93	□□□□□ -1.62
PTPN20-213	ENST00000502705		A0A087X0T9	212 aa		4.92	□□□□□ -1.62
PTPN20-213	ENST00000502705	WDR27	A2RRH5	827 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms