RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 KNTC1P50748 2209 aa18.73■□□□□ 0.59
ATPAF2-209ENST00000497871 CELSR3Q9NYQ7 3312 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 PLK4O00444 970 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 CLCN1P35523 988 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 MTIF2P46199 727 aaKnown RBP18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 IRAK1P51617 712 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 BPIFB4P59827 614 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 CNTN1Q12860 1018 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 STAT4Q14765 748 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 CAMK4Q16566 473 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 PTPN20Q4JDL3 420 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 AGBL4Q5VU57 503 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 PDZD3Q86UT5 571 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 SLC47A2Q86VL8 602 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 TRIM69Q86WT6 500 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 SH2D3CQ8N5H7 860 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 MLKLQ8NB16 471 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 PIP4K2CQ8TBX8 421 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 HNRNPLLQ8WVV9 542 aaKnown RBP18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 SIK2Q9H0K1 926 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 WDCPQ9H6R7 721 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 SIX2Q9NPC8 291 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 TMEM51Q9NW97 253 aa18.72■□□□□ 0.59
ATPAF2-209ENST00000497871 TMEM131Q92545 1883 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 URB1O60287 2271 aaKnown RBP18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 RFPL3O75679 317 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 JUPP14923 745 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 CXCR3P49682 368 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 KRT83P78385 493 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 BNIP3Q12983 259 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 BRMS1LQ5PSV4 323 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 Q6ZVU0 165 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 SPATS2Q86XZ4 545 aaKnown RBP18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 TSC1Q92574 1164 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 NPY6RQ99463 290 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 TKTL2Q9H0I9 626 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 MUC3BQ9H195 1237 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 ARHGEF38Q9NXL2 777 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 HS3ST2Q9Y278 367 aa18.71■□□□□ 0.59
ATPAF2-209ENST00000497871 PRAMEF26H0Y7S4 382 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 CBX4O00257 560 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 RNGTTO60942 597 aaKnown RBP18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 F9P00740 461 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 MAT2AP31153 395 aaKnown RBP18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 HNF1BP35680 557 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 GGCXP38435 758 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 UBE2HP62256 183 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 CCDC15Q0P6D6 951 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 DNAJC3Q13217 504 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 SETMARQ53H47 684 aaPredicted RBP18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 ACBD5Q5T8D3 534 aaPredicted RBP18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 SFMBT2Q5VUG0 894 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 FAM71AQ8IYT1 594 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 NT5C3BQ969T7 300 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 PGAP3Q96FM1 320 aaPredicted RBP18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 C1orf74Q96LT6 269 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 C2orf49Q9BVC5 232 aaPredicted RBP18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 PREBQ9HCU5 417 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 PIGVQ9NUD9 493 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 AJAP1Q9UKB5 411 aaPredicted RBP18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 STAP1Q9ULZ2 295 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 FARP1Q9Y4F1 1045 aaPredicted RBP18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 PAXBP1Q9Y5B6 917 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 ITPR1Q14643 2758 aa18.7■□□□□ 0.58
ATPAF2-209ENST00000497871 PLXNA2O75051 1894 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 A0A087WV48 116 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 DRGXA6NNA5 263 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 BNIP3LO60238 219 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 CNTN5O94779 1100 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 ADCY5O95622 1261 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 MT-CO1P00395 513 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 SRCP12931 536 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 ACADVLP49748 655 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 RNASE9P60153 205 aaKnown RBP18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 ILKQ13418 452 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 MAN2A1Q16706 1144 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 TPD52L1Q16890 204 aaPredicted RBP18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 POM121L1PQ3SYA9 428 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 ALFQ53S48 1182 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 OTUD1Q5VV17 481 aaPredicted RBP18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 NEK5Q6P3R8 708 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 KANSL1Q7Z3B3 1105 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 SETD3Q86TU7 594 aaPredicted RBP18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 ATP11CQ8NB49 1132 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 TMEM35BQ8NCS4 154 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 TMIEQ8NEW7 156 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 CCDC114Q96M63 670 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 PDCL3Q9H2J4 239 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 PLCB1Q9NQ66 1216 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 ANLNQ9NQW6 1124 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 NBEAQ8NFP9 2946 aa18.69■□□□□ 0.58
ATPAF2-209ENST00000497871 ADAMTS20P59510 1910 aa18.68■□□□□ 0.58
ATPAF2-209ENST00000497871 COL5A1P20908 1838 aaPredicted RBP18.68■□□□□ 0.58
ATPAF2-209ENST00000497871 RHOCP08134 193 aa18.68■□□□□ 0.58
ATPAF2-209ENST00000497871 CKMT2P17540 419 aa18.68■□□□□ 0.58
ATPAF2-209ENST00000497871 CHRNA3P32297 505 aa18.68■□□□□ 0.58
ATPAF2-209ENST00000497871 CDH5P33151 784 aaPredicted RBP18.68■□□□□ 0.58
ATPAF2-209ENST00000497871 SCNN1AP37088 669 aa18.68■□□□□ 0.58
ATPAF2-209ENST00000497871 GABRB2P47870 512 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms