RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 DDX3YO15523 660 aaKnown RBP10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 NDUFS2O75306 463 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 LUC7L3O95232 432 aaKnown RBP10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 FTCDO95954 541 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 ACADMP11310 421 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 PSMA2P25787 234 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 IL1R2P27930 398 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 CD6P30203 668 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 OXTRP30559 389 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 SDC4P31431 198 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 MARCKSL1P49006 195 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 COPAP53621 1224 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 ST8SIA6P61647 398 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 ZNF33AQ06730 810 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 LMAN2Q12907 356 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 PIGHQ14442 188 aaPredicted RBP10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 PTPRNQ16849 979 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 ZNF569Q5MCW4 686 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 RABGAP1LQ5R372 815 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 MEI1Q5TIA1 1274 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 RAP1GAP2Q684P5 730 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 STRADAQ7RTN6 431 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 MTERF4Q7Z6M4 381 aaKnown RBP10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 DAAM2Q86T65 1068 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 CARNMT1Q8N4J0 409 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 KDM1BQ8NB78 822 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 TRIM58Q8NG06 486 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 OR2T3Q8NH03 318 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 CEP76Q8TAP6 659 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 FAM172AQ8WUF8 416 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 CYB5D2Q8WUJ1 264 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 KRT35Q92764 455 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 FOXJ1Q92949 421 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 TTC17Q96AE7 1141 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 MYEOVQ96EZ4 313 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 HES6Q96HZ4 224 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 LMLNQ96KR4 655 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 NUSAP1Q9BXS6 441 aaKnown RBP10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 RXFP3Q9NSD7 469 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 PIGVQ9NUD9 493 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 KIAA1522Q9P206 1035 aaPredicted RBP10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 SUN2Q9UH99 717 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 XPO7Q9UIA9 1087 aaKnown RBP10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 PILRBQ9UKJ0 227 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 STAP1Q9ULZ2 295 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 PACSIN2Q9UNF0 486 aaPredicted RBP10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 PLXND1Q9Y4D7 1925 aa10.86□□□□□ -0.67
SCAMP4-208ENST00000489554 RALGAPA1Q6GYQ0 2036 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 SYNJ2BP-COX16A0A087WUM0 186 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 A0A1B0GVM2 712 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 MED19A0JLT2 244 aaPredicted RBP10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 TCAF2A6NFQ2 919 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 M0QYT0 321 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 F9P00740 461 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 IGLV3-19P01714 112 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 C7P10643 843 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 HLA-EP13747 358 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 ITPKAP23677 461 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 CASQ1P31415 396 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 PCK1P35558 622 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 CSKP41240 450 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 SULT1E1P49888 294 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 PEX5P50542 639 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 OXCT1P55809 520 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 IRX4P78413 519 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 ATP11AP98196 1134 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 ZBTB16Q05516 673 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 NME3Q13232 169 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 SLC12A1Q13621 1099 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 ACAP1Q15027 740 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 IFI16Q16666 785 aaKnown RBP10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 CDO1Q16878 200 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 DUOXA1Q1HG43 343 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 TRIM61Q5EBN2 209 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 SYCP2LQ5T4T6 812 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 DCAF12L1Q5VU92 463 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 SLC23A3Q6PIS1 610 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 SND1Q7KZF4 910 aaKnown RBP eCLIP10.85□□□□□ -0.675e-8■□□□□ 11
SCAMP4-208ENST00000489554 CFAP52Q8N1V2 620 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 CADM4Q8NFZ8 388 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 ZNF592Q92610 1267 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 ALG3Q92685 438 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 ZNF419Q96HQ0 510 aaPredicted RBP10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 HSPA12BQ96MM6 686 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 PRMT1Q99873 361 aaKnown RBP10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 TMEM9BQ9NQ34 198 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 TMEM74BQ9NUR3 256 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 WSB2Q9NYS7 404 aaPredicted RBP10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 COX16Q9P0S2 106 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 LCMT1Q9UIC8 334 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 ABCA7Q8IZY2 2146 aa10.85□□□□□ -0.67
SCAMP4-208ENST00000489554 DNAH14Q0VDD8 3507 aa10.84□□□□□ -0.67
SCAMP4-208ENST00000489554 UQCRHLA0A096LP55 91 aa10.84□□□□□ -0.67
SCAMP4-208ENST00000489554 PATE3B3GLJ2 98 aa10.84□□□□□ -0.67
SCAMP4-208ENST00000489554 TM4SF5O14894 197 aa10.84□□□□□ -0.67
SCAMP4-208ENST00000489554 ATP1A1P05023 1023 aaKnown RBP10.84□□□□□ -0.67
SCAMP4-208ENST00000489554 UQCRHP07919 91 aa10.84□□□□□ -0.67
SCAMP4-208ENST00000489554 SRPRAP08240 638 aaKnown RBP10.84□□□□□ -0.67
SCAMP4-208ENST00000489554 SERPINF2P08697 491 aa10.84□□□□□ -0.67
SCAMP4-208ENST00000489554 CTNNA2P26232 953 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms