RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 ATP2C2O75185 946 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 FAM157BP0CG42 384 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 SDSP20132 328 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 CD33P20138 364 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 F8A1P23610 371 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 MEOX1P50221 254 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 PMS2P54278 862 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 KRT83P78385 493 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 DPYDQ12882 1025 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 IFRD2Q12894 506 aaPredicted RBP6.75□□□□□ -1.33
CHD6-209ENST00000482596 HDAC1Q13547 482 aaPredicted RBP6.75□□□□□ -1.33
CHD6-209ENST00000482596 CST6Q15828 149 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 ENOX2Q16206 610 aaKnown RBP6.75□□□□□ -1.33
CHD6-209ENST00000482596 CFAP221Q4G0U5 840 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 SAMD5Q5TGI4 173 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 FYB2Q5VWT5 728 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 PRPF39Q86UA1 669 aaKnown RBP6.75□□□□□ -1.33
CHD6-209ENST00000482596 SPATA2LQ8IUW3 424 aaPredicted RBP6.75□□□□□ -1.33
CHD6-209ENST00000482596 BEND7Q8N7W2 519 aaPredicted RBP6.75□□□□□ -1.33
CHD6-209ENST00000482596 NCOA7Q8NI08 942 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 EDARADDQ8WWZ3 215 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 SGSM3Q96HU1 749 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 SPATA17Q96L03 361 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 CCDC43Q96MW1 224 aaKnown RBP6.75□□□□□ -1.33
CHD6-209ENST00000482596 TCHPQ9BT92 498 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 B3GNT4Q9C0J1 378 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 FZD3Q9NPG1 666 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 CCM2LQ9NUG4 571 aaPredicted RBP6.75□□□□□ -1.33
CHD6-209ENST00000482596 PADI4Q9UM07 663 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 NTNG1Q9Y2I2 539 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 GPC6Q9Y625 555 aaPredicted RBP6.75□□□□□ -1.33
CHD6-209ENST00000482596 DNMT3AQ9Y6K1 912 aaPredicted RBP6.75□□□□□ -1.33
CHD6-209ENST00000482596 RNF215Q9Y6U7 377 aa6.75□□□□□ -1.33
CHD6-209ENST00000482596 CACNA1CQ13936 2221 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 MGAM2Q2M2H8 2515 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 K7ERI5 159 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 AQP9O43315 295 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 PENKP01210 267 aaPredicted RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 FGF3P11487 239 aaPredicted RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 BDNFP23560 247 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 ADSLP30566 484 aaPredicted RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 KIR3DL1P43629 444 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 CLDN2P57739 230 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 NLRP5P59047 1200 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 HNRNPKP61978 463 aaKnown RBP eCLIP6.74□□□□□ -1.33
CHD6-209ENST00000482596 ADAM8P78325 824 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 ARID5AQ03989 594 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 ERV3-1Q14264 604 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 EIF4HQ15056 248 aaKnown RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 PHF19Q5T6S3 580 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 SPATA1Q5VX52 437 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 MPZL3Q6UWV2 235 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 C1orf229Q6ZS94 237 aaPredicted RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 NOP9Q86U38 636 aaKnown RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 OSTM1Q86WC4 334 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 ANKMY2Q8IV38 441 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 MMAAQ8IVH4 418 aaKnown RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 SLITRK4Q8IW52 837 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 ZC3H3Q8IXZ2 948 aaKnown RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 RBMXL3Q8N7X1 1067 aaKnown RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 LMX1AQ8TE12 382 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 SCG3Q8WXD2 468 aaKnown RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 GOLGA1Q92805 767 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 KLK6Q92876 244 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 RILPL2Q969X0 211 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 KIAA1143Q96AT1 154 aaPredicted RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 TMEM159Q96B96 161 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 PHACTR1Q9C0D0 580 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 LRRN3Q9H3W5 708 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 RWDD1Q9H446 243 aaPredicted RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 FBRSQ9HAH7 460 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 CHORDC1Q9UHD1 332 aaPredicted RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 PILRAQ9UKJ1 303 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 PNMA8BQ9ULN7 279 aaPredicted RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 FZD4Q9ULV1 537 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 PCDHA12Q9UN75 941 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 ZNF281Q9Y2X9 895 aa6.74□□□□□ -1.33
CHD6-209ENST00000482596 SONP18583 2426 aaKnown RBP6.74□□□□□ -1.33
CHD6-209ENST00000482596 A0A0B4J269 797 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 SHISA8B8ZZ34 492 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 PRAMEF26H0Y7S4 382 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 PRC1O43663 620 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 SIN3BO75182 1162 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 GCATO75600 419 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 RTN3O95197 1032 aaPredicted RBP6.73□□□□□ -1.33
CHD6-209ENST00000482596 LY6G6DO95868 133 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 INHBBP09529 407 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 ARAFP10398 606 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 PRLRP16471 622 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 SLC8A1P32418 973 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 MAGEA11P43364 429 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 PPP3CCP48454 512 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 PGFP49763 221 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 EFNA5P52803 228 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 METAP1P53582 386 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 MC1RQ01726 317 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 CHAF1BQ13112 559 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 CEBPEQ15744 281 aa6.73□□□□□ -1.33
CHD6-209ENST00000482596 PFKFB3Q16875 520 aaPredicted RBP6.73□□□□□ -1.33
CHD6-209ENST00000482596 ANKRD45Q5TZF3 282 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms