RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 KLF16Q9BXK1 252 aaPredicted RBP10.44□□□□□ -0.74
PCCB-213ENST00000475214 ALG13Q9NP73 1137 aaKnown RBP10.44□□□□□ -0.74
PCCB-213ENST00000475214 NDFIP2Q9NV92 336 aa10.44□□□□□ -0.74
PCCB-213ENST00000475214 FETUBQ9UGM5 382 aa10.44□□□□□ -0.74
PCCB-213ENST00000475214 ZC3H7BQ9UGR2 993 aaKnown RBP10.44□□□□□ -0.74
PCCB-213ENST00000475214 LGALS13Q9UHV8 139 aa10.44□□□□□ -0.74
PCCB-213ENST00000475214 IPO11Q9UI26 975 aaKnown RBP10.44□□□□□ -0.74
PCCB-213ENST00000475214 SLC24A2Q9UI40 661 aa10.44□□□□□ -0.74
PCCB-213ENST00000475214 AAR2Q9Y312 384 aaKnown RBP10.44□□□□□ -0.74
PCCB-213ENST00000475214 NUP205Q92621 2012 aa10.44□□□□□ -0.74
PCCB-213ENST00000475214 PLXNA4Q9HCM2 1894 aa10.44□□□□□ -0.74
PCCB-213ENST00000475214 TTC28Q96AY4 2481 aa10.44□□□□□ -0.74
PCCB-213ENST00000475214 SHROOM3Q8TF72 1996 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 TRANK1O15050 2925 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 C2orf78A6NCI8 922 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 EPOPA6NHQ4 379 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 SDR42E2A6NKP2 422 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 RASA4BC9J798 803 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 F5H423 210 aaPredicted RBP10.43□□□□□ -0.74
PCCB-213ENST00000475214 POC1B-GALNT4F8VUJ3 575 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 TRDMT1O14717 391 aaKnown RBP10.43□□□□□ -0.74
PCCB-213ENST00000475214 RASA4O43374 803 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 RAMP2O60895 175 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 AVILO75366 819 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 STC2O76061 302 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 CNTN5O94779 1100 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 ARHGEF15O94989 841 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 AP2A1O95782 977 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 LATS1O95835 1130 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 GLUD1P00367 558 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 RB1P06400 928 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 IRF1P10914 325 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 NFKB1P19838 968 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 GABRR2P28476 465 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 OR1E1P30953 314 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 CORO1AP31146 461 aaKnown RBP10.43□□□□□ -0.74
PCCB-213ENST00000475214 STX2P32856 288 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 CD68P34810 354 aaPredicted RBP10.43□□□□□ -0.74
PCCB-213ENST00000475214 MAGEA3P43357 314 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 GEMIN4P57678 1058 aaKnown RBP10.43□□□□□ -0.74
PCCB-213ENST00000475214 TFF2Q03403 129 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 NR1H3Q13133 447 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 MTM1Q13496 603 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 PARP15Q460N3 678 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 ALFQ53S48 1182 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 PPM1LQ5SGD2 360 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 PLPP4Q5VZY2 271 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 NADSYN1Q6IA69 706 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 ARHGAP36Q6ZRI8 547 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 ZNF534Q76KX8 674 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 RTL10Q7L3V2 364 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 CCNJLQ8IV13 435 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 MRPL43Q8N983 215 aaKnown RBP10.43□□□□□ -0.74
PCCB-213ENST00000475214 SPPL3Q8TCT6 385 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 MICAL1Q8TDZ2 1067 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 FBF1Q8TES7 1133 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 USP33Q8TEY7 942 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 GDPD5Q8WTR4 605 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 POF1BQ8WVV4 589 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 FATE1Q969F0 183 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 CFAP36Q96G28 342 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 NECAB3Q96P71 396 aaPredicted RBP10.43□□□□□ -0.74
PCCB-213ENST00000475214 CYTH2Q99418 400 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 IL12RB2Q99665 862 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 EBNA1BP2Q99848 306 aaKnown RBP10.43□□□□□ -0.74
PCCB-213ENST00000475214 CAPS2Q9BXY5 557 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 RNF38Q9H0F5 515 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 ACSS3Q9H6R3 686 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 CNOT10Q9H9A5 744 aaKnown RBP10.43□□□□□ -0.74
PCCB-213ENST00000475214 LRRC40Q9H9A6 602 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 SP110Q9HB58 689 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 TRPC7Q9HCX4 862 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 ZNF334Q9HCZ1 680 aaPredicted RBP10.43□□□□□ -0.74
PCCB-213ENST00000475214 TLR9Q9NR96 1032 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 GKN1Q9NS71 199 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 RABGEF1Q9UJ41 708 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 MAD1L1Q9Y6D9 718 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 DOCK4Q8N1I0 1966 aa10.43□□□□□ -0.74
PCCB-213ENST00000475214 C2orf71A6NGG8 1288 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 H3BNC9 293 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 ANXA9O76027 345 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 SUN1O94901 812 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 C1RP00736 705 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 PFKLP17858 780 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 HDCP19113 662 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 CDC25CP30307 473 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 MSH2P43246 934 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 ATP1A2P50993 1020 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 RENBPP51606 427 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 IRAK1P51617 712 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 GEMP55040 296 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 CDH4P55283 916 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 IL10RBQ08334 325 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 HNRNPDQ14103 355 aaKnown RBP10.42□□□□□ -0.74
PCCB-213ENST00000475214 POLD3Q15054 466 aaPredicted RBP10.42□□□□□ -0.74
PCCB-213ENST00000475214 RASA2Q15283 850 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 PUS10Q3MIT2 529 aaKnown RBP10.42□□□□□ -0.74
PCCB-213ENST00000475214 FAM133BQ5BKY9 247 aaKnown RBP10.42□□□□□ -0.74
PCCB-213ENST00000475214 TNFAIP8L3Q5GJ75 292 aa10.42□□□□□ -0.74
PCCB-213ENST00000475214 NAPEPLDQ6IQ20 393 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms