RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 STK40Q8N2I9 435 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 SH2D3CQ8N5H7 860 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 ARFGAP1Q8N6T3 406 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 GPR161Q8N6U8 529 aaKnown RBP10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 RTL3Q8N8U3 475 aaKnown RBP10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 GANCQ8TET4 914 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 PTPRN2Q92932 1015 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 CCDC114Q96M63 670 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 EIF3CQ99613 913 aaKnown RBP10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 PACSIN1Q9BY11 444 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 MAGEH1Q9H213 219 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 ARRDC1-AS1Q9H2J1 176 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 ZWILCHQ9H900 591 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 CD93Q9NPY3 652 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 ITM2CQ9NQX7 267 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 NDFIP2Q9NV92 336 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 USP36Q9P275 1121 aaKnown RBP10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 LCMT1Q9UIC8 334 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 NCKAP1Q9Y2A7 1128 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 FARP1Q9Y4F1 1045 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 PCDHGA5Q9Y5G8 931 aa10.84□□□□□ -0.67
TRAPPC12-213ENST00000461577 WASH4PA8MWX3 477 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 BNIP3LO60238 219 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 LRP3O75074 770 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 SRCP12931 536 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 GLDCP23378 1020 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 CD6P30203 668 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 CYLC1P35663 651 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 ACVRL1P37023 503 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 TPMTP51580 245 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 ZNF135P52742 658 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 ZBTB16Q05516 673 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 SLC20A2Q08357 652 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 SEMA3BQ13214 749 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 POLD3Q15054 466 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 CA9Q16790 459 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 SMTNL2Q2TAL5 461 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 BOLA3Q53S33 107 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 SPDYCQ5MJ68 293 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 DAB2IPQ5VWQ8 1189 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 LINGO4Q6UY18 593 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 ARMCX6Q7L4S7 300 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 CYP2U1Q7Z449 544 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 DSG4Q86SJ6 1040 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 FAM124AQ86V42 546 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 MMAAQ8IVH4 418 aaKnown RBP10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 KIAA2013Q8IYS2 634 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 DEFB119Q8N690 84 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 NIPA2Q8N8Q9 360 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 FRS2Q8WU20 508 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 OR8D1Q8WZ84 308 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 HSPH1Q92598 858 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 ARHGEF2Q92974 986 aaKnown RBP10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 TOE1Q96GM8 510 aaKnown RBP10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 PANX2Q96RD6 677 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 KCTD15Q96SI1 283 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 ACE2Q9BYF1 805 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 RSPH9Q9H1X1 276 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 SCML1Q9UN30 329 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 NEU3Q9UQ49 428 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 HS3ST2Q9Y278 367 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 CHD5Q8TDI0 1954 aa10.83□□□□□ -0.68
TRAPPC12-213ENST00000461577 NUP205Q92621 2012 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 TMEM110-MUSTN1A8MSY1 372 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 GOLGA6L6A8MZA4 724 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 H3BRJ5 948 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 MID1O15344 667 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 ZMPSTE24O75844 475 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 PROSCO94903 275 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 ADH1BP00325 375 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 MT-CO1P00395 513 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 IL1BP01584 269 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 VAV1P15498 845 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 GOT1P17174 413 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 IL1R2P27930 398 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 SLC8A1P32418 973 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 ARL4AP40617 200 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 MAGEA1P43355 309 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 RECQLP46063 649 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 PSMD8P48556 350 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 CLCN6P51797 869 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 GEMIN4P57678 1058 aaKnown RBP10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 YBEYP58557 167 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 KRT81Q14533 505 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 ELAVL3Q14576 367 aaKnown RBP10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 CST6Q15828 149 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 KCNT1Q5JUK3 1230 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 LYSMD4Q5XG99 296 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 Q6ZVU0 165 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 RHOT2Q8IXI1 618 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 CCDC170Q8IYT3 715 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 SLC35G2Q8TBE7 412 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 TEKT4Q8WW24 435 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 PIGKQ92643 395 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 FAM129BQ96TA1 746 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 OMDQ99983 421 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 GPR174Q9BXC1 333 aa10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 PABPC3Q9H361 631 aaKnown RBP10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 LUC7LQ9NQ29 371 aaKnown RBP10.82□□□□□ -0.68
TRAPPC12-213ENST00000461577 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms