RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 NXF1Q9UBU9 619 aaKnown RBP15.78■□□□□ 0.12
SSR4-206ENST00000460616 CDH7Q9ULB5 785 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 SNX13Q9Y5W8 968 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 A0A087WXM4 84 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 KPNA7A9QM74 516 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 G3V2L1 256 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 PLOD2O00469 737 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 VWA5AO00534 786 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 TRIM38O00635 465 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 TRIM13O60858 407 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 PSAPP07602 524 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 CTBSQ01459 385 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 PRKCEQ02156 737 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 ORC1Q13415 861 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 PTK2BQ14289 1009 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 SEL1L3Q68CR1 1132 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 PTAR1Q7Z6K3 402 aaPredicted RBP15.77■□□□□ 0.12
SSR4-206ENST00000460616 CDKL3Q8IVW4 592 aaPredicted RBP15.77■□□□□ 0.12
SSR4-206ENST00000460616 PLD6Q8N2A8 252 aaKnown RBP15.77■□□□□ 0.12
SSR4-206ENST00000460616 RXFP2Q8WXD0 754 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 PDCD2LQ9BRP1 358 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 ANKRD60Q9BZ19 345 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 SNX15Q9NRS6 342 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 TUBA8Q9NY65 449 aaPredicted RBP15.77■□□□□ 0.12
SSR4-206ENST00000460616 CDC14AQ9UNH5 594 aa15.77■□□□□ 0.12
SSR4-206ENST00000460616 XPOTO43592 962 aaKnown RBP15.77■□□□□ 0.11
SSR4-206ENST00000460616 TADA2AO75478 443 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 VAPBO95292 243 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 STAMBPO95630 424 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 PROZP22891 400 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 RPL10P27635 214 aaKnown RBP15.77■□□□□ 0.11
SSR4-206ENST00000460616 ADSLP30566 484 aaPredicted RBP15.77■□□□□ 0.11
SSR4-206ENST00000460616 GARSP41250 739 aaKnown RBP15.77■□□□□ 0.11
SSR4-206ENST00000460616 BCAP31P51572 246 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 RFTN1Q14699 578 aaPredicted RBP15.77■□□□□ 0.11
SSR4-206ENST00000460616 EMC2Q15006 297 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 ARHGEF16Q5VV41 709 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 SLC9A4Q6AI14 798 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 BRSK2Q8IWQ3 736 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 SLC15A3Q8IY34 581 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 FAM47BQ8NA70 645 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 ASB9Q96DX5 294 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 NPAS2Q99743 824 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 CIB1Q99828 191 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 PTPN18Q99952 460 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 BRD8Q9H0E9 1235 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 TUT1Q9H6E5 874 aaKnown RBP15.77■□□□□ 0.11
SSR4-206ENST00000460616 SLC38A10Q9HBR0 1119 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 PIH1D1Q9NWS0 290 aaKnown RBP15.77■□□□□ 0.11
SSR4-206ENST00000460616 MTMR10Q9NXD2 777 aa15.77■□□□□ 0.11
SSR4-206ENST00000460616 RBM47A0AV96 593 aaKnown RBP15.76■□□□□ 0.11
SSR4-206ENST00000460616 GIPC1O14908 333 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 HTRA2O43464 458 aaPredicted RBP15.76■□□□□ 0.11
SSR4-206ENST00000460616 ATE1O95260 518 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 ZBTB11O95625 1053 aaPredicted RBP15.76■□□□□ 0.11
SSR4-206ENST00000460616 EDN1P05305 212 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 CYP2C8P10632 490 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 MPSTP25325 297 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 RPL14P50914 215 aaKnown RBP15.76■□□□□ 0.11
SSR4-206ENST00000460616 SESN2P58004 480 aaPredicted RBP15.76■□□□□ 0.11
SSR4-206ENST00000460616 PRAMEP78395 509 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 HTRA3P83110 453 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 NAB1Q13506 487 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 TRIM25Q14258 630 aaKnown RBP15.76■□□□□ 0.11
SSR4-206ENST00000460616 BOLA3Q53S33 107 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 TMEM198Q66K66 360 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 NXNQ6DKJ4 435 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 C16orf87Q6PH81 154 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 REPS2Q8NFH8 660 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 TCHPQ9BT92 498 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 FADS3Q9Y5Q0 445 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 FAM155AB1AL88 458 aaPredicted RBP15.76■□□□□ 0.11
SSR4-206ENST00000460616 F5H423 210 aaPredicted RBP15.76■□□□□ 0.11
SSR4-206ENST00000460616 CHRNGP07510 517 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 ERVK-10P10266 1014 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 ZNF24P17028 368 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 NAMPTP43490 491 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 RAP1GAPP47736 663 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 RXRGP48443 463 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 TFAMQ00059 246 aaKnown RBP15.76■□□□□ 0.11
SSR4-206ENST00000460616 RHDQ02161 417 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 GHRHRQ02643 423 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 SEMA5AQ13591 1074 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 HERC3Q15034 1050 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 MTX3Q5HYI7 312 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 OGFOD2Q6N063 350 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 ZBTB33Q86T24 672 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 CENPSQ8N2Z9 138 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 MOCOSQ96EN8 888 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 GPATCH1Q9BRR8 931 aaKnown RBP15.76■□□□□ 0.11
SSR4-206ENST00000460616 GATA5Q9BWX5 397 aaPredicted RBP15.76■□□□□ 0.11
SSR4-206ENST00000460616 PCDHAC1Q9H158 963 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 NOL11Q9H8H0 719 aaKnown RBP15.76■□□□□ 0.11
SSR4-206ENST00000460616 ZBTB26Q9HCK0 441 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 PXMP2Q9NR77 195 aa15.76■□□□□ 0.11
SSR4-206ENST00000460616 IPO11Q9UI26 975 aaKnown RBP15.76■□□□□ 0.11
SSR4-206ENST00000460616 C2CD4BA6NLJ0 364 aa15.75■□□□□ 0.11
SSR4-206ENST00000460616 SOBPA7XYQ1 873 aa15.75■□□□□ 0.11
SSR4-206ENST00000460616 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.75■□□□□ 0.11
SSR4-206ENST00000460616 TMX2-CTNND1H3BSU7 103 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms