RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PDLIM1O00151 329 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 NCAM2O15394 837 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 USP12O75317 370 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 CABYRO75952 493 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 CYP2B6P20813 491 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 RPL5P46777 297 aaKnown RBP19.44■□□□□ 0.7
SDCBP-204ENST00000447182 NPY2RP49146 381 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 ADIGQ0VDE8 80 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 LAMB3Q13751 1172 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 FLOT2Q14254 428 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 SLC27A1Q6PCB7 646 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 LIMS2Q7Z4I7 341 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 SPATA24Q86W54 205 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 TP53INP2Q8IXH6 220 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 PGAM4Q8N0Y7 254 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 DNAAF3Q8N9W5 541 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 MFSD3Q96ES6 412 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 CDRT15Q96T59 188 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 SLC9A7Q96T83 725 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 SNX25Q9H3E2 840 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 VTI1BQ9UEU0 232 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 UBQLN1Q9UMX0 589 aaKnown RBP19.44■□□□□ 0.7
SDCBP-204ENST00000447182 TSC2P49815 1807 aa19.44■□□□□ 0.7
SDCBP-204ENST00000447182 GOLGA8QA0A0J9YX86 632 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 A0A1B0GVG6 124 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 GOLGA8OA6NCC3 632 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 GOLGA8NF8WBI6 632 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 GRID2O43424 1007 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 ETS2P15036 469 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 CD1EP15812 388 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 TFEBP19484 476 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 RGS2P41220 211 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 AIF1P55008 147 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 PPIDQ08752 370 aaKnown RBP19.43■□□□□ 0.7
SDCBP-204ENST00000447182 PRKAA1Q13131 559 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 CNGA3Q16281 694 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 ANO4Q32M45 955 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 PPM1LQ5SGD2 360 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 AGR3Q8TD06 166 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 NDRG1Q92597 394 aaKnown RBP19.43■□□□□ 0.7
SDCBP-204ENST00000447182 DLG3Q92796 817 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 LRGUKQ96M69 825 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 GPR22Q99680 433 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 C16orf70Q9BSU1 422 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 C1QTNF1Q9BXJ1 281 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 BRD8Q9H0E9 1235 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 GBA3Q9H227 469 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 MROH8Q9H579 483 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 GJD2Q9UKL4 321 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 PDCD11Q14690 1871 aaKnown RBP19.43■□□□□ 0.7
SDCBP-204ENST00000447182 M0QYT0 321 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 TADA2AO75478 443 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 DNAJB1P25685 340 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 TKTP29401 623 aaKnown RBP19.43■□□□□ 0.7
SDCBP-204ENST00000447182 PMLP29590 882 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 GRIA4P48058 902 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 RFTN1Q14699 578 aaPredicted RBP19.43■□□□□ 0.7
SDCBP-204ENST00000447182 R3HDM1Q15032 1099 aaKnown RBP19.43■□□□□ 0.7
SDCBP-204ENST00000447182 GLRA4Q5JXX5 417 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 MARCH8Q5T0T0 291 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 GJC2Q5T442 439 aaPredicted RBP19.43■□□□□ 0.7
SDCBP-204ENST00000447182 ARHGAP22Q7Z5H3 698 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 WNT8BQ93098 351 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 EMID1Q96A84 441 aaPredicted RBP19.43■□□□□ 0.7
SDCBP-204ENST00000447182 OPTNQ96CV9 577 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 SLC2A13Q96QE2 648 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 EPAS1Q99814 870 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 NSMCE4AQ9NXX6 385 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 UBAP1Q9NZ09 502 aa19.43■□□□□ 0.7
SDCBP-204ENST00000447182 MTSS1O43312 755 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 CD4P01730 458 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 TFAP2AP05549 437 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 SBK3P0C264 359 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 ZNF286BP0CG31 522 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 ERCC2P18074 760 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 XRCC1P18887 633 aaPredicted RBP19.42■□□□□ 0.7
SDCBP-204ENST00000447182 EPHA3P29320 983 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 NSUN2Q08J23 767 aaKnown RBP eCLIP19.42■□□□□ 0.7
SDCBP-204ENST00000447182 SEMA3BQ13214 749 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 ITGA7Q13683 1181 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 ARL13AQ5H913 290 aaPredicted RBP19.42■□□□□ 0.7
SDCBP-204ENST00000447182 TAPT1Q6NXT6 567 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 MAMDC4Q6UXC1 1216 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 ARMCX2Q7L311 632 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 AHI1Q8N157 1196 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 ACVR1CQ8NER5 493 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 NTAN1Q96AB6 310 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 TNIP3Q96KP6 325 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 HNRNPABQ99729 332 aaKnown RBP19.42■□□□□ 0.7
SDCBP-204ENST00000447182 EIF2AQ9BY44 585 aaKnown RBP19.42■□□□□ 0.7
SDCBP-204ENST00000447182 DUSP16Q9BY84 665 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 ZNF696Q9H7X3 374 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 C20orf96Q9NUD7 363 aaPredicted RBP19.42■□□□□ 0.7
SDCBP-204ENST00000447182 UNCXA6NJT0 531 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 TK2O00142 265 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 SPTLC1O15269 473 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 ZBTB24O43167 697 aaPredicted RBP19.42■□□□□ 0.7
SDCBP-204ENST00000447182 PIGNO95427 931 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 CRTAMO95727 393 aa19.42■□□□□ 0.7
SDCBP-204ENST00000447182 CD68P34810 354 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms