RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 NLRP14Q86W24 1093 aa24.23■■□□□ 1.47
VARS-217ENST00000440048 SH2D3CQ8N5H7 860 aa24.23■■□□□ 1.47
VARS-217ENST00000440048 DCAF4L2Q8NA75 395 aa24.23■■□□□ 1.47
VARS-217ENST00000440048 FNIP1Q8TF40 1166 aa24.23■■□□□ 1.47
VARS-217ENST00000440048 RETREG1Q9H6L5 497 aa24.23■■□□□ 1.47
VARS-217ENST00000440048 PILRBQ9UKJ0 227 aa24.23■■□□□ 1.47
VARS-217ENST00000440048 ATXN2Q99700 1313 aaKnown RBP24.23■■□□□ 1.47
VARS-217ENST00000440048 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.22■■□□□ 1.47
VARS-217ENST00000440048 PATE3B3GLJ2 98 aa24.22■■□□□ 1.47
VARS-217ENST00000440048 MT-CO1P00395 513 aa24.22■■□□□ 1.47
VARS-217ENST00000440048 GNA12Q03113 381 aa24.22■■□□□ 1.47
VARS-217ENST00000440048 DLG2Q15700 870 aa24.22■■□□□ 1.47
VARS-217ENST00000440048 TTC31Q49AM3 519 aaPredicted RBP24.22■■□□□ 1.47
VARS-217ENST00000440048 ACCSLQ4AC99 568 aa24.22■■□□□ 1.47
VARS-217ENST00000440048 MMAAQ8IVH4 418 aaKnown RBP24.22■■□□□ 1.47
VARS-217ENST00000440048 ARFGAP1Q8N6T3 406 aa24.22■■□□□ 1.47
VARS-217ENST00000440048 SPON2Q9BUD6 331 aa24.22■■□□□ 1.47
VARS-217ENST00000440048 PABPC3Q9H361 631 aaKnown RBP24.22■■□□□ 1.47
VARS-217ENST00000440048 MRPL47Q9HD33 250 aaKnown RBP24.22■■□□□ 1.47
VARS-217ENST00000440048 RXFP3Q9NSD7 469 aa24.22■■□□□ 1.47
VARS-217ENST00000440048 NDFIP2Q9NV92 336 aa24.22■■□□□ 1.47
VARS-217ENST00000440048 TMEM248Q9NWD8 314 aa24.22■■□□□ 1.47
VARS-217ENST00000440048 HS3ST2Q9Y278 367 aa24.22■■□□□ 1.47
VARS-217ENST00000440048 KHNYNO15037 678 aaKnown RBP24.21■■□□□ 1.47
VARS-217ENST00000440048 SRCP12931 536 aa24.21■■□□□ 1.47
VARS-217ENST00000440048 GLDCP23378 1020 aa24.21■■□□□ 1.47
VARS-217ENST00000440048 DPP6P42658 865 aa24.21■■□□□ 1.47
VARS-217ENST00000440048 MAPKAPK2P49137 400 aa24.21■■□□□ 1.47
VARS-217ENST00000440048 CST6Q15828 149 aa24.21■■□□□ 1.47
VARS-217ENST00000440048 PEAR1Q5VY43 1037 aaPredicted RBP24.21■■□□□ 1.47
VARS-217ENST00000440048 CADM4Q8NFZ8 388 aa24.21■■□□□ 1.47
VARS-217ENST00000440048 OR8K1Q8NGG5 319 aa24.21■■□□□ 1.47
VARS-217ENST00000440048 FOXJ1Q92949 421 aa24.21■■□□□ 1.47
VARS-217ENST00000440048 DNAJC7Q99615 494 aa24.21■■□□□ 1.47
VARS-217ENST00000440048 THAP2Q9H0W7 228 aa24.21■■□□□ 1.47
VARS-217ENST00000440048 DNAI1Q9UI46 699 aa24.21■■□□□ 1.47
VARS-217ENST00000440048 SCML1Q9UN30 329 aa24.21■■□□□ 1.47
VARS-217ENST00000440048 NCOR2Q9Y618 2525 aa24.2■■□□□ 1.46
VARS-217ENST00000440048 MID1O15344 667 aa24.2■■□□□ 1.46
VARS-217ENST00000440048 SLC8A1P32418 973 aa24.2■■□□□ 1.46
VARS-217ENST00000440048 ACSL1P33121 698 aa24.2■■□□□ 1.46
VARS-217ENST00000440048 EIF4A3P38919 411 aaKnown RBP24.2■■□□□ 1.46
VARS-217ENST00000440048 ELAVL3Q14576 367 aaKnown RBP24.2■■□□□ 1.46
VARS-217ENST00000440048 CCDC122Q5T0U0 273 aa24.2■■□□□ 1.46
VARS-217ENST00000440048 ALKBH5Q6P6C2 394 aaKnown RBP24.2■■□□□ 1.46
VARS-217ENST00000440048 LINGO4Q6UY18 593 aa24.2■■□□□ 1.46
VARS-217ENST00000440048 ATP11CQ8NB49 1132 aa24.2■■□□□ 1.46
VARS-217ENST00000440048 ATP13A1Q9HD20 1204 aa24.2■■□□□ 1.46
VARS-217ENST00000440048 K7ERQ8 282 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 CBX4O00257 560 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 CREB3O43889 395 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 ZMPSTE24O75844 475 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 RNF8O76064 485 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 EPHB2P29323 1055 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 HOXD12P35452 270 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 ACVRL1P37023 503 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 PSMD8P48556 350 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 SEMA3BQ13214 749 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 SYCP2LQ5T4T6 812 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 SARM1Q6SZW1 724 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 Q6ZVU0 165 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 USP30Q70CQ3 517 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 RGL4Q8IZJ4 473 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 GANCQ8TET4 914 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 PEBP4Q96S96 227 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 EPAS1Q99814 870 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 ACE2Q9BYF1 805 aaPredicted RBP24.19■■□□□ 1.46
VARS-217ENST00000440048 BTBD1Q9H0C5 482 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 GPATCH2LQ9NWQ4 482 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 FBXL12Q9NXK8 326 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 PCSK1NQ9UHG2 260 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 EVLQ9UI08 416 aaPredicted RBP24.19■■□□□ 1.46
VARS-217ENST00000440048 NENFQ9UMX5 172 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 NCKAP1Q9Y2A7 1128 aa24.19■■□□□ 1.46
VARS-217ENST00000440048 METTL12A8MUP2 240 aa24.18■■□□□ 1.46
VARS-217ENST00000440048 SLC30A4O14863 429 aa24.18■■□□□ 1.46
VARS-217ENST00000440048 SMAD6O43541 496 aaKnown RBP24.18■■□□□ 1.46
VARS-217ENST00000440048 TPM1P09493 284 aa24.18■■□□□ 1.46
VARS-217ENST00000440048 MIPP30301 263 aa24.18■■□□□ 1.46
VARS-217ENST00000440048 IRX4P78413 519 aa24.18■■□□□ 1.46
VARS-217ENST00000440048 TRIM61Q5EBN2 209 aa24.18■■□□□ 1.46
VARS-217ENST00000440048 IL31Q6EBC2 164 aa24.18■■□□□ 1.46
VARS-217ENST00000440048 RTL3Q8N8U3 475 aaKnown RBP24.18■■□□□ 1.46
VARS-217ENST00000440048 OR8D1Q8WZ84 308 aa24.18■■□□□ 1.46
VARS-217ENST00000440048 ARHGEF2Q92974 986 aaKnown RBP24.18■■□□□ 1.46
VARS-217ENST00000440048 SERGEFQ9UGK8 458 aa24.18■■□□□ 1.46
VARS-217ENST00000440048 AP4E1Q9UPM8 1137 aa24.18■■□□□ 1.46
VARS-217ENST00000440048 A0A1W2PP55 124 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 LNP1A1A4G5 178 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 MEI4A8MW99 385 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 LRCH4O75427 683 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 SEMA4FO95754 770 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 ADH1BP00325 375 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 IL1BP01584 269 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 CYP1A2P05177 515 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 MAOBP27338 520 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 ETFBP38117 255 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 CLCN6P51797 869 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 LIMK1P53667 647 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 ARF5P84085 180 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms