RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 CILPO75339 1184 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 PFKMP08237 780 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 CKMT2P17540 419 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 CNTFP26441 200 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 ART3Q13508 389 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 USP41Q3LFD5 358 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 STEAP4Q687X5 459 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 STRA8Q7Z7C7 330 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 TRIM50Q86XT4 487 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 SPATA6LQ8N4H0 392 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 DDI1Q8WTU0 396 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 ANKRD36BP1Q96IX9 119 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 PCYT2Q99447 389 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 TEX13BQ9BXU2 312 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 DTLQ9NZJ0 730 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 A0A096LPK6 155 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 VAPBO95292 243 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 PIGNO95427 931 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 PSMB4P28070 264 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 PRDX6P30041 224 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 SEMA5AQ13591 1074 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 GK5Q6ZS86 529 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 CDKL3Q8IVW4 592 aaPredicted RBP13.81□□□□□ -0.2
PCNX3-202ENST00000439247 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.81□□□□□ -0.2
PCNX3-202ENST00000439247 C2orf69Q8N8R5 385 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 NSUN6Q8TEA1 469 aaKnown RBP13.81□□□□□ -0.2
PCNX3-202ENST00000439247 TRAPPC12Q8WVT3 735 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 KHSRPQ92945 711 aaKnown RBP eCLIP13.81□□□□□ -0.2
PCNX3-202ENST00000439247 BCO2Q9BYV7 579 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 INIPQ9NRY2 104 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 OLAHQ9NV23 265 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 PRPF19Q9UMS4 504 aaKnown RBP13.81□□□□□ -0.2
PCNX3-202ENST00000439247 CDC14AQ9UNH5 594 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 SNX13Q9Y5W8 968 aa13.81□□□□□ -0.2
PCNX3-202ENST00000439247 GRID2O43424 1007 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 CNMDO75829 334 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 GABBR2O75899 941 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 GNAO1P09471 354 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 GOT1P17174 413 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 AVPR1AP37288 418 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 NDST1P52848 882 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 PDK2Q15119 407 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 ARL13AQ5H913 290 aaPredicted RBP13.8□□□□□ -0.2
PCNX3-202ENST00000439247 ERI1Q8IV48 349 aaKnown RBP13.8□□□□□ -0.2
PCNX3-202ENST00000439247 CCDC185Q8N715 623 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 RANBP9Q96S59 729 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 GCOM2Q9BZD3 368 aaPredicted RBP13.8□□□□□ -0.2
PCNX3-202ENST00000439247 TRPV6Q9H1D0 765 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 TMEM134Q9H6X4 195 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 SFMBT1Q9UHJ3 866 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 KCNU1A8MYU2 1149 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 MATN2O00339 956 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 BCAS2O75934 225 aaPredicted RBP13.8□□□□□ -0.2
PCNX3-202ENST00000439247 ZNF23P17027 643 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 AP3M2P53677 418 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 BOLA3Q53S33 107 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 CLVS1Q8IUQ0 354 aaPredicted RBP13.8□□□□□ -0.2
PCNX3-202ENST00000439247 RNF169Q8NCN4 708 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 BRI3BPQ8WY22 251 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 APBA2Q99767 749 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 BRCA2P51587 3418 aa13.8□□□□□ -0.2
PCNX3-202ENST00000439247 SEC24DO94855 1032 aaPredicted RBP13.79□□□□□ -0.2
PCNX3-202ENST00000439247 STAMBPO95630 424 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 SDC4P31431 198 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 CDK9P50750 372 aaKnown RBP13.79□□□□□ -0.2
PCNX3-202ENST00000439247 NAGLUP54802 743 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 HUNKP57058 714 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 CBLBQ13191 982 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 IKBKEQ14164 716 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 BORAQ6PGQ7 559 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 LAYNQ6UX15 382 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 EEPD1Q7L9B9 569 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 BBS5Q8N3I7 341 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 OR52K1Q8NGK4 314 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 GIPC3Q8TF64 312 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 HTR3CQ8WXA8 447 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 IRGQQ8WZA9 623 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 CERS2Q96G23 380 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 NOL11Q9H8H0 719 aaKnown RBP13.79□□□□□ -0.2
PCNX3-202ENST00000439247 RBPJLQ9UBG7 517 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 ZNF638Q14966 1978 aaKnown RBP13.79□□□□□ -0.2
PCNX3-202ENST00000439247 SPATA31C2B4DYI2 1134 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 INO80B-WBP1J3KQ70 363 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 PHGDHO43175 533 aaKnown RBP13.79□□□□□ -0.2
PCNX3-202ENST00000439247 HCRTO43612 131 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 TRIM13O60858 407 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 H6PDO95479 791 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 C2P06681 752 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 COL6A2P12110 1019 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 TFEBP19484 476 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 GRIA4P48058 902 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 NUMBP49757 651 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 SLC5A3P53794 718 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 LAMTOR4Q0VGL1 99 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 PITRM1Q5JRX3 1037 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 SEL1L3Q68CR1 1132 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 JADE1Q6IE81 842 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 KRT80Q6KB66 452 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 ZFP1Q6P2D0 407 aa13.79□□□□□ -0.2
PCNX3-202ENST00000439247 ZPBP2Q6X784 338 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms