RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 RSPO4Q2I0M5 234 aaPredicted RBP27.05■■□□□ 1.92
CDK9-202ENST00000421939 PEAR1Q5VY43 1037 aaPredicted RBP27.05■■□□□ 1.92
CDK9-202ENST00000421939 NETO1Q8TDF5 533 aa27.05■■□□□ 1.92
CDK9-202ENST00000421939 FOXJ1Q92949 421 aa27.05■■□□□ 1.92
CDK9-202ENST00000421939 DNAJC7Q99615 494 aa27.05■■□□□ 1.92
CDK9-202ENST00000421939 PILRBQ9UKJ0 227 aa27.05■■□□□ 1.92
CDK9-202ENST00000421939 LOC105378220A0A1B0GUY1 285 aaPredicted RBP27.04■■□□□ 1.92
CDK9-202ENST00000421939 DLG2Q15700 870 aa27.04■■□□□ 1.92
CDK9-202ENST00000421939 ACCSLQ4AC99 568 aa27.04■■□□□ 1.92
CDK9-202ENST00000421939 MMAAQ8IVH4 418 aaKnown RBP27.04■■□□□ 1.92
CDK9-202ENST00000421939 CADM4Q8NFZ8 388 aa27.04■■□□□ 1.92
CDK9-202ENST00000421939 OR8K1Q8NGG5 319 aa27.04■■□□□ 1.92
CDK9-202ENST00000421939 FAM129BQ96TA1 746 aa27.04■■□□□ 1.92
CDK9-202ENST00000421939 EPAS1Q99814 870 aa27.04■■□□□ 1.92
CDK9-202ENST00000421939 SPON2Q9BUD6 331 aa27.04■■□□□ 1.92
CDK9-202ENST00000421939 ATP13A1Q9HD20 1204 aa27.04■■□□□ 1.92
CDK9-202ENST00000421939 TMEM74BQ9NUR3 256 aa27.04■■□□□ 1.92
CDK9-202ENST00000421939 PATE3B3GLJ2 98 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 KHNYNO15037 678 aaKnown RBP27.03■■□□□ 1.92
CDK9-202ENST00000421939 GDF9O60383 454 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 RNF8O76064 485 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 MT-CO1P00395 513 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 SRCP12931 536 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 SDHBP21912 280 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 GLDCP23378 1020 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 ETFBP38117 255 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 EIF4A3P38919 411 aaKnown RBP27.03■■□□□ 1.92
CDK9-202ENST00000421939 PSMD8P48556 350 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 SYCP2LQ5T4T6 812 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 ALKBH5Q6P6C2 394 aaKnown RBP27.03■■□□□ 1.92
CDK9-202ENST00000421939 SARM1Q6SZW1 724 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 Q6ZVU0 165 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 ATP11CQ8NB49 1132 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 THAP2Q9H0W7 228 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 RXFP3Q9NSD7 469 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 NDFIP2Q9NV92 336 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 DNAI1Q9UI46 699 aa27.03■■□□□ 1.92
CDK9-202ENST00000421939 MEI4A8MW99 385 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 CBX4O00257 560 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 MID1O15344 667 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 CREB3O43889 395 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 EPHB2P29323 1055 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 CLCN6P51797 869 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 SFSWAPQ12872 951 aaKnown RBP27.02■■□□□ 1.92
CDK9-202ENST00000421939 SEMA3BQ13214 749 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 CCDC122Q5T0U0 273 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 RETSATQ6NUM9 610 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 LINGO4Q6UY18 593 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 USP30Q70CQ3 517 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 ARFGAP1Q8N6T3 406 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 GANCQ8TET4 914 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 OR8D1Q8WZ84 308 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 BTBD1Q9H0C5 482 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 PCED1AQ9H1Q7 454 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 FBXL12Q9NXK8 326 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 DLL3Q9NYJ7 618 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 EVLQ9UI08 416 aaPredicted RBP27.02■■□□□ 1.92
CDK9-202ENST00000421939 AP4E1Q9UPM8 1137 aa27.02■■□□□ 1.92
CDK9-202ENST00000421939 NUMA1Q14980 2115 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 RAMP2O60895 175 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 MFAP3LO75121 409 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 ADH1BP00325 375 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 SLC8A1P32418 973 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 ACSL1P33121 698 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 TRIM61Q5EBN2 209 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 WDR45BQ5MNZ6 344 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 IL31Q6EBC2 164 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 DSG4Q86SJ6 1040 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 RGL4Q8IZJ4 473 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 RTL3Q8N8U3 475 aaKnown RBP27.01■■□□□ 1.91
CDK9-202ENST00000421939 PEBP4Q96S96 227 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 EDEM2Q9BV94 578 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 ABHD10Q9NUJ1 306 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 ZNHIT6Q9NWK9 470 aaKnown RBP27.01■■□□□ 1.91
CDK9-202ENST00000421939 GPATCH2LQ9NWQ4 482 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 PCSK1NQ9UHG2 260 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 NENFQ9UMX5 172 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 NCKAP1Q9Y2A7 1128 aa27.01■■□□□ 1.91
CDK9-202ENST00000421939 A0A1W2PP55 124 aa27■■□□□ 1.91
CDK9-202ENST00000421939 LNP1A1A4G5 178 aa27■■□□□ 1.91
CDK9-202ENST00000421939 K7ERQ8 282 aa27■■□□□ 1.91
CDK9-202ENST00000421939 PRPSAP2O60256 369 aa27■■□□□ 1.91
CDK9-202ENST00000421939 LRCH4O75427 683 aa27■■□□□ 1.91
CDK9-202ENST00000421939 ZMPSTE24O75844 475 aa27■■□□□ 1.91
CDK9-202ENST00000421939 SEMA4FO95754 770 aa27■■□□□ 1.91
CDK9-202ENST00000421939 IL1BP01584 269 aa27■■□□□ 1.91
CDK9-202ENST00000421939 MIPP30301 263 aa27■■□□□ 1.91
CDK9-202ENST00000421939 HTR7P34969 479 aa27■■□□□ 1.91
CDK9-202ENST00000421939 ACVRL1P37023 503 aa27■■□□□ 1.91
CDK9-202ENST00000421939 PUM1Q14671 1186 aaKnown RBP eCLIP27■■□□□ 1.91
CDK9-202ENST00000421939 TSR1Q2NL82 804 aaKnown RBP27■■□□□ 1.91
CDK9-202ENST00000421939 RABEPKQ7Z6M1 372 aa27■■□□□ 1.91
CDK9-202ENST00000421939 NCAPGQ9BPX3 1015 aa27■■□□□ 1.91
CDK9-202ENST00000421939 SNRNP25Q9BV90 132 aaKnown RBP27■■□□□ 1.91
CDK9-202ENST00000421939 ACE2Q9BYF1 805 aaPredicted RBP27■■□□□ 1.91
CDK9-202ENST00000421939 MAGEH1Q9H213 219 aa27■■□□□ 1.91
CDK9-202ENST00000421939 CATSPERBQ9H7T0 1116 aa27■■□□□ 1.91
CDK9-202ENST00000421939 SGK2Q9HBY8 427 aa27■■□□□ 1.91
CDK9-202ENST00000421939 SERGEFQ9UGK8 458 aa27■■□□□ 1.91
CDK9-202ENST00000421939 CHD5Q8TDI0 1954 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms