RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TSC1Q92574 1164 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 VPS28Q9UK41 221 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 AJAP1Q9UKB5 411 aaPredicted RBP15.23■□□□□ 0.03
RPS28-201ENST00000417088 TBC1D30Q9Y2I9 924 aa15.23■□□□□ 0.03
RPS28-201ENST00000417088 GTPBP10A4D1E9 387 aaKnown RBP15.22■□□□□ 0.03
RPS28-201ENST00000417088 ALOX15BO15296 676 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 CLDN11O75508 207 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 DAB1O75553 588 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 CNTN5O94779 1100 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 C1SP09871 688 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 JUPP14923 745 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 NOS2P35228 1153 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 NUDT1P36639 197 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 ACADVLP49748 655 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 SLC6A3Q01959 620 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 PTK2Q05397 1052 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 POM121L1PQ3SYA9 428 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 PTPN20Q4JDL3 420 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 SFMBT2Q5VUG0 894 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 OTUD1Q5VV17 481 aaPredicted RBP15.22■□□□□ 0.03
RPS28-201ENST00000417088 SMYD5Q6GMV2 418 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 KANSL1Q7Z3B3 1105 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 IQCHQ86VS3 1027 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 TRIM69Q86WT6 500 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 OXR1Q8N573 874 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 SH2D3CQ8N5H7 860 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 PIP4K2CQ8TBX8 421 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 LRIG1Q96JA1 1093 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 NOX5Q96PH1 765 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 SIK2Q9H0K1 926 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 SIX2Q9NPC8 291 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 ANLNQ9NQW6 1124 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 PIGVQ9NUD9 493 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 KIAA1468Q9P260 1216 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 DMTF1Q9Y222 760 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 LOC400499M0QZD8 3231 aa15.22■□□□□ 0.03
RPS28-201ENST00000417088 A0A087WV48 116 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 C1QTNF3-AMACRE9PGA6 284 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 M0QYT0 321 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 FOXN3O00409 490 aaPredicted RBP15.21■□□□□ 0.03
RPS28-201ENST00000417088 BNIP3LO60238 219 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 MT-CO1P00395 513 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 CDK4P11802 303 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 ZNF18P17022 549 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 TFE3P19532 575 aaPredicted RBP15.21■□□□□ 0.03
RPS28-201ENST00000417088 CLCN1P35523 988 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 KRT9P35527 623 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 CDH4P55283 916 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 TAS2R38P59533 333 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 OVGP1Q12889 678 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 SLC47A2Q86VL8 602 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 ZNF397Q8NF99 534 aaPredicted RBP15.21■□□□□ 0.03
RPS28-201ENST00000417088 PSMB7Q99436 277 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 NPY6RQ99463 290 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 DNAJC12Q9UKB3 198 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 HS3ST2Q9Y278 367 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 DOCK9Q9BZ29 2069 aa15.21■□□□□ 0.03
RPS28-201ENST00000417088 SMG1Q96Q15 3661 aaKnown RBP15.2■□□□□ 0.02
RPS28-201ENST00000417088 PRAMEF26H0Y7S4 382 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 I6L893 689 aaPredicted RBP15.2■□□□□ 0.02
RPS28-201ENST00000417088 SNAP91O60641 907 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 MAGEC1O60732 1142 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 ADCY5O95622 1261 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 CTSLP07711 333 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 PNMA6AP0CW24 399 aaPredicted RBP15.2■□□□□ 0.02
RPS28-201ENST00000417088 SRCP12931 536 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 HNF1BP35680 557 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 CXCR3P49682 368 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 SNX16P57768 344 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 STAT4Q14765 748 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 CAMK4Q16566 473 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 ALFQ53S48 1182 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 FBXL19Q6PCT2 694 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 ZNF683Q8IZ20 524 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 TKTL2Q9H0I9 626 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 MUC3BQ9H195 1237 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 WDCPQ9H6R7 721 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 SYNCQ9H7C4 482 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 PLCB1Q9NQ66 1216 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 ARHGEF38Q9NXL2 777 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 RRN3Q9NYV6 651 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 CA5BQ9Y2D0 317 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 SNX10Q9Y5X0 201 aa15.2■□□□□ 0.02
RPS28-201ENST00000417088 K7ERQ8 282 aa15.19■□□□□ 0.02
RPS28-201ENST00000417088 RNGTTO60942 597 aaKnown RBP15.19■□□□□ 0.02
RPS28-201ENST00000417088 RHOCP08134 193 aa15.19■□□□□ 0.02
RPS28-201ENST00000417088 CKMT2P17540 419 aa15.19■□□□□ 0.02
RPS28-201ENST00000417088 CHRNA3P32297 505 aa15.19■□□□□ 0.02
RPS28-201ENST00000417088 MTIF2P46199 727 aaKnown RBP15.19■□□□□ 0.02
RPS28-201ENST00000417088 RNASE9P60153 205 aaKnown RBP15.19■□□□□ 0.02
RPS28-201ENST00000417088 KRT83P78385 493 aa15.19■□□□□ 0.02
RPS28-201ENST00000417088 TARDBPQ13148 414 aaKnown RBP eCLIP15.19■□□□□ 0.02
RPS28-201ENST00000417088 SETMARQ53H47 684 aaPredicted RBP15.19■□□□□ 0.02
RPS28-201ENST00000417088 BRMS1LQ5PSV4 323 aa15.19■□□□□ 0.02
RPS28-201ENST00000417088 PIP5KL1Q5T9C9 394 aa15.19■□□□□ 0.02
RPS28-201ENST00000417088 HES3Q5TGS1 186 aa15.19■□□□□ 0.02
RPS28-201ENST00000417088 DPY19L2P1Q6NXN4 242 aa15.19■□□□□ 0.02
RPS28-201ENST00000417088 ZDHHC17Q8IUH5 632 aa15.19■□□□□ 0.02
RPS28-201ENST00000417088 FAM71AQ8IYT1 594 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms