RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 SLC9A3P48764 834 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 AKAP14Q86UN6 197 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 CCDC25Q86WR0 208 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 ASCC1Q8N9N2 400 aaKnown RBP20.79■□□□□ 0.92
AP1S3-205ENST00000415298 GSTCDQ8NEC7 633 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 HSPH1Q92598 858 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 TRIM63Q969Q1 353 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 RMND5AQ9H871 391 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 FBXO6Q9NRD1 293 aaPredicted RBP20.79■□□□□ 0.92
AP1S3-205ENST00000415298 NAALADL1Q9UQQ1 740 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 AP3M1Q9Y2T2 418 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 SCN10AQ9Y5Y9 1956 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 XPO1O14980 1071 aaKnown RBP20.78■□□□□ 0.92
AP1S3-205ENST00000415298 MSCO60682 206 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 CST5P28325 142 aaPredicted RBP20.78■□□□□ 0.92
AP1S3-205ENST00000415298 ESRRGP62508 458 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 NFE2L1Q14494 772 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 RHPN2Q8IUC4 686 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 C7orf31Q8N865 590 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 OR10Z1Q8NGY1 313 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 VTI1AQ96AJ9 217 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 K7ENM7 598 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 PRPF4O43172 522 aaKnown RBP eCLIP20.78■□□□□ 0.92
AP1S3-205ENST00000415298 ATE1O95260 518 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 ACLYP53396 1101 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 CALCOCO2Q13137 446 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 FBXO46Q6PJ61 603 aaPredicted RBP20.78■□□□□ 0.92
AP1S3-205ENST00000415298 ZFPM2Q8WW38 1151 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 ART4Q93070 314 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 OR2B2Q9GZK3 357 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 GIMAP4Q9NUV9 329 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 TXNDC16Q9P2K2 825 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 SLC8A2Q9UPR5 921 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 NRCAMQ92823 1304 aa20.78■□□□□ 0.92
AP1S3-205ENST00000415298 VTNP04004 478 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 RFC1P35251 1148 aaPredicted RBP20.77■□□□□ 0.92
AP1S3-205ENST00000415298 KRT20P35900 424 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 PTPROQ16827 1216 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 ZBED5Q49AG3 693 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 FAM47CQ5HY64 1035 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 UBE2UQ5VVX9 321 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 ANKRD40Q6AI12 368 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 HAUS6Q7Z4H7 955 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 SLFN11Q7Z7L1 901 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 CCDC89Q8N998 374 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 FBXO27Q8NI29 283 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 CEP19Q96LK0 163 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 PLEKHA5Q9HAU0 1116 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 ATP13A2Q9NQ11 1180 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 A0A087X0T9 212 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 MIF4GDA9UHW6 222 aaKnown RBP20.77■□□□□ 0.92
AP1S3-205ENST00000415298 CYP26A1O43174 497 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 PTGIRP43119 386 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 HSPA13P48723 471 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 DMP1Q13316 513 aaPredicted RBP20.77■□□□□ 0.92
AP1S3-205ENST00000415298 ZNF618Q5T7W0 954 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 CPNE9Q8IYJ1 553 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 GUF1Q8N442 669 aaKnown RBP20.77■□□□□ 0.92
AP1S3-205ENST00000415298 PCSK9Q8NBP7 692 aaKnown RBP20.77■□□□□ 0.92
AP1S3-205ENST00000415298 KATNAL1Q9BW62 490 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 KMT5AQ9NQR1 393 aa20.77■□□□□ 0.92
AP1S3-205ENST00000415298 THG1LQ9NWX6 298 aaKnown RBP20.77■□□□□ 0.92
AP1S3-205ENST00000415298 KIAA0100Q14667 2235 aaKnown RBP20.77■□□□□ 0.91
AP1S3-205ENST00000415298 ZNF839A8K0R7 811 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 SLC9A3R1O14745 358 aaPredicted RBP20.76■□□□□ 0.91
AP1S3-205ENST00000415298 KPNA6O60684 536 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 RAG1P15918 1043 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 POLR2BP30876 1174 aaKnown RBP20.76■□□□□ 0.91
AP1S3-205ENST00000415298 BLVRAP53004 296 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 CAPSQ13938 189 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 TFDP1Q14186 410 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 TRIP13Q15645 432 aaPredicted RBP20.76■□□□□ 0.91
AP1S3-205ENST00000415298 C6orf10Q5SRN2 563 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 PXDC1Q5TGL8 231 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 SETD3Q86TU7 594 aaPredicted RBP20.76■□□□□ 0.91
AP1S3-205ENST00000415298 LINC01465Q8N7H1 131 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 PSD4Q8NDX1 1056 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 TMEM161BQ8NDZ6 487 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 OMA1Q96E52 524 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 TM9SF2Q99805 663 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 FAM49AQ9H0Q0 323 aaPredicted RBP20.76■□□□□ 0.91
AP1S3-205ENST00000415298 FRMPD3Q5JV73 1810 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 LRRIQ4A6NIV6 560 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 ICAM2P13598 275 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 LAMTOR4Q0VGL1 99 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 BNIP3Q12983 259 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 IER5Q5VY09 327 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 ANKRD26P1Q6NSI1 321 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 KIAA0319LQ8IZA0 1049 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 TPCN2Q8NHX9 752 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 NTPCRQ9BSD7 190 aaKnown RBP20.76■□□□□ 0.91
AP1S3-205ENST00000415298 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.76■□□□□ 0.91
AP1S3-205ENST00000415298 STRA6Q9BX79 667 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 COL1A2P08123 1366 aa20.76■□□□□ 0.91
AP1S3-205ENST00000415298 FCHO1O14526 889 aa20.75■□□□□ 0.91
AP1S3-205ENST00000415298 SHOXO15266 292 aa20.75■□□□□ 0.91
AP1S3-205ENST00000415298 KRT3P12035 628 aa20.75■□□□□ 0.91
AP1S3-205ENST00000415298 GNL1P36915 607 aaPredicted RBP20.75■□□□□ 0.91
AP1S3-205ENST00000415298 POLR2GP62487 172 aaKnown RBP eCLIP20.75■□□□□ 0.91
AP1S3-205ENST00000415298 MAPRE2Q15555 327 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms