RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 VPS28Q9UK41 221 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 NRCAMQ92823 1304 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 PDCD11Q14690 1871 aaKnown RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 HDAC3O15379 428 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 ZBTB24O43167 697 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 PSMD3O43242 534 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 STRNO43815 780 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 CABYRO75952 493 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 SORBS2O94875 1100 aaKnown RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 PTPN1P18031 435 aaKnown RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 RPL14P50914 215 aaKnown RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 POLE2P56282 527 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 LILRA4P59901 499 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 TMEM62Q0P6H9 643 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 MSLNQ13421 630 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 OLIG2Q13516 323 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 TRIP10Q15642 601 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 ANO4Q32M45 955 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 LIN52Q52LA3 116 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 TCHHL1Q5QJ38 904 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 LPCAT4Q643R3 524 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 SEL1L3Q68CR1 1132 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 ZYG11AQ6WRX3 759 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 CLEC20AQ6ZU45 233 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 OSTM1Q86WC4 334 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 TP53INP2Q8IXH6 220 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 CPSF7Q8N684 471 aaKnown RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 ICA1LQ8NDH6 482 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 MFSD3Q96ES6 412 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 VPS39Q96JC1 886 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 GPR22Q99680 433 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 OXCT2Q9BYC2 517 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 CDHR5Q9HBB8 845 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 WDR6Q9NNW5 1121 aaKnown RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 MAN1C1Q9NR34 630 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 C20orf96Q9NUD7 363 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 RRN3Q9NYV6 651 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 VTI1BQ9UEU0 232 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 TLK1Q9UKI8 766 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 PSMD13Q9UNM6 376 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 SLC4A7Q9Y6M7 1214 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 E2F8A0AVK6 867 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 H3BNX3 289 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 ATP9BO43861 1147 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 USP12O75317 370 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 BEST1O76090 585 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 SNUPNO95149 360 aaKnown RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 SNAI1O95863 264 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 PIK3R1P27986 724 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 PEX2P28328 305 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 CD68P34810 354 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 POLD2P49005 469 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 NDUFV1P49821 464 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 TKTL1P51854 596 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 AQP4P55087 323 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 SH3BGRP55822 239 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 IRF9Q00978 393 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 CDH17Q12864 832 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 PRKAA1Q13131 559 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 TTLL12Q14166 644 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 PRPSAP1Q14558 356 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 SMAD1Q15797 465 aaKnown RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 MMEL1Q495T6 779 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 OGFRL1Q5TC84 451 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 RASIP1Q5U651 963 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 AP1ARQ63HQ0 302 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 NAPEPLDQ6IQ20 393 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 PAQR9Q6ZVX9 377 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 OR6J1Q8NGC5 347 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 MAPK15Q8TD08 544 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 SPATA16Q9BXB7 569 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 ACE2Q9BYF1 805 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-204ENST00000404424 CAB39LQ9H9S4 337 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 RNF19AQ9NV58 838 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 FBXW11Q9UKB1 542 aa10.94□□□□□ -0.66
CLIP4-204ENST00000404424 FAM72CH0Y354 149 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 CLDN5O00501 218 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 AP1G1O43747 822 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 FAM200BP0CF97 657 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 COL6A2P12110 1019 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 SMPD1P17405 629 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 GMPRP36959 345 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 GALNT2Q10471 571 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 HERC3Q15034 1050 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 DLG2Q15700 870 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 LRRC36Q1X8D7 754 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 CERCAMQ5T4B2 595 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 FAM72AQ5TYM5 149 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 FAM72DQ6L9T8 149 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 ZFP1Q6P2D0 407 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 LINC00523Q86TU6 105 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 FAM72BQ86X60 149 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 KYQ8NBH2 561 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 NCSTNQ92542 709 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 OR52B2Q96RD2 323 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 MLPHQ9BV36 600 aaPredicted RBP10.93□□□□□ -0.66
CLIP4-204ENST00000404424 RHOJQ9H4E5 214 aa10.93□□□□□ -0.66
CLIP4-204ENST00000404424 IARS2Q9NSE4 1012 aaKnown RBP10.93□□□□□ -0.66
CLIP4-204ENST00000404424 KLK14Q9P0G3 267 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms