RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 ARHGAP20Q9P2F6 1191 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 PPM1HQ9ULR3 514 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 KNTC1P50748 2209 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 SMG1Q96Q15 3661 aaKnown RBP17.32■□□□□ 0.36
SMN2-201ENST00000380741 DOCK4Q8N1I0 1966 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 ARID1BQ8NFD5 2236 aaPredicted RBP17.31■□□□□ 0.36
SMN2-201ENST00000380741 I6L893 689 aaPredicted RBP17.31■□□□□ 0.36
SMN2-201ENST00000380741 CBX4O00257 560 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 MCF2LO15068 1137 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 ALOX15BO15296 676 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 YKT6O15498 198 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 SLC7A4O43246 635 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 CNTN5O94779 1100 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 ITGAVP06756 1048 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 EPHA8P29322 1005 aaPredicted RBP17.31■□□□□ 0.36
SMN2-201ENST00000380741 MAT2AP31153 395 aaKnown RBP17.31■□□□□ 0.36
SMN2-201ENST00000380741 CXCR3P49682 368 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 CDH4P55283 916 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 RNASE9P60153 205 aaKnown RBP17.31■□□□□ 0.36
SMN2-201ENST00000380741 CAMK2BQ13554 666 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 ALFQ53S48 1182 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 SLC45A4Q5BKX6 768 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 MIIPQ5JXC2 388 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 FAM46CQ5VWP2 391 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 C19orf48Q6RUI8 117 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 PRPF39Q86UA1 669 aaKnown RBP17.31■□□□□ 0.36
SMN2-201ENST00000380741 PIP4K2CQ8TBX8 421 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 KDM4CQ9H3R0 1056 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 NDST4Q9H3R1 872 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 WDCPQ9H6R7 721 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 ARHGEF38Q9NXL2 777 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 RRN3Q9NYV6 651 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMN2-201ENST00000380741 RAXQ9Y2V3 346 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 SNX10Q9Y5X0 201 aa17.31■□□□□ 0.36
SMN2-201ENST00000380741 URB1O60287 2271 aaKnown RBP17.3■□□□□ 0.36
SMN2-201ENST00000380741 FAM170AA1A519 330 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 TRABD2BA6NFA1 517 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 C1QTNF3-AMACRE9PGA6 284 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 ENC1O14682 589 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 BNIP3LO60238 219 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 SNAP91O60641 907 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 MT-CO1P00395 513 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 SRCP12931 536 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 PRKCSHP14314 528 aaPredicted RBP17.3■□□□□ 0.36
SMN2-201ENST00000380741 ZNF18P17022 549 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 ARRB1P49407 418 aaPredicted RBP17.3■□□□□ 0.36
SMN2-201ENST00000380741 SULT1E1P49888 294 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 DNAJC3Q13217 504 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 VWA3BQ502W6 1294 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 HSP90AA4PQ58FG1 418 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 BRMS1LQ5PSV4 323 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 TRIM69Q86WT6 500 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 FAM114A1Q8IWE2 563 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 EID2Q8N6I1 236 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 MFSD2AQ8NA29 543 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 TMEM35BQ8NCS4 154 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 NT5C3BQ969T7 300 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 CNDP2Q96KP4 475 aaKnown RBP17.3■□□□□ 0.36
SMN2-201ENST00000380741 PSMB7Q99436 277 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 ERVMER34-1Q9H9K5 563 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 DKK4Q9UBT3 224 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 STAP1Q9ULZ2 295 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 HS3ST2Q9Y278 367 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 FHOD1Q9Y613 1164 aa17.3■□□□□ 0.36
SMN2-201ENST00000380741 LDOC1O95751 146 aaPredicted RBP17.29■□□□□ 0.36
SMN2-201ENST00000380741 CTSLP07711 333 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 RHOCP08134 193 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 CYP11B1P15538 503 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 CDH5P33151 784 aaPredicted RBP17.29■□□□□ 0.36
SMN2-201ENST00000380741 BPIFB4P59827 614 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 BNIP3Q12983 259 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 RAPGEF1Q13905 1077 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 DRAP1Q14919 205 aaPredicted RBP17.29■□□□□ 0.36
SMN2-201ENST00000380741 DPCR1Q3MIW9 517 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 FAM102AQ5T9C2 384 aaPredicted RBP17.29■□□□□ 0.36
SMN2-201ENST00000380741 SPATS2Q86XZ4 545 aaKnown RBP17.29■□□□□ 0.36
SMN2-201ENST00000380741 ZNF683Q8IZ20 524 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 PGAP3Q96FM1 320 aaPredicted RBP17.29■□□□□ 0.36
SMN2-201ENST00000380741 TBCBQ99426 244 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 TUBGCP2Q9BSJ2 902 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 C2orf49Q9BVC5 232 aaPredicted RBP17.29■□□□□ 0.36
SMN2-201ENST00000380741 PDCL3Q9H2J4 239 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 TMPRSS4Q9NRS4 437 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 VPS51Q9UID3 782 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 PCDHGA1Q9Y5H4 931 aa17.29■□□□□ 0.36
SMN2-201ENST00000380741 BAHCC1Q9P281 2608 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 NUDT1P36639 197 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 GABRB2P47870 512 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 RXRGP48443 463 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 TAS2R38P59533 333 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 KRT83P78385 493 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 DEUP1Q05D60 604 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 CYP4F3Q08477 520 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 KCNMA1Q12791 1236 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 COL28A1Q2UY09 1125 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 PIP5KL1Q5T9C9 394 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 SFMBT2Q5VUG0 894 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 TAF3Q5VWG9 929 aa17.28■□□□□ 0.36
SMN2-201ENST00000380741 XYLT1Q86Y38 959 aa17.28■□□□□ 0.36
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