RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 PSMA2P25787 234 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 PTGER3P43115 390 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 NUMBP49757 651 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 STK19P49842 368 aaPredicted RBP10.1□□□□□ -0.79
CD48-202ENST00000368046 ZNF33AQ06730 810 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 DLG2Q15700 870 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 EFHC2Q5JST6 749 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 SYCP2LQ5T4T6 812 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 ERMARDQ5T6L9 678 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 LYSMD4Q5XG99 296 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 ZNF776Q68DI1 518 aaPredicted RBP10.1□□□□□ -0.79
CD48-202ENST00000368046 RWDD4Q6NW29 188 aaKnown RBP10.1□□□□□ -0.79
CD48-202ENST00000368046 SARM1Q6SZW1 724 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 PRR23CQ6ZRP0 262 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 CYP2U1Q7Z449 544 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 SYT12Q8IV01 421 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 PYROXD2Q8N2H3 581 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 SH2D3CQ8N5H7 860 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 DEFB119Q8N690 84 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 FRS2Q8WU20 508 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 PIGKQ92643 395 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 ZNF653Q96CK0 615 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 TBC1D31Q96DN5 1066 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 PSMB7Q99436 277 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 DNAJC7Q99615 494 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 SPON2Q9BUD6 331 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 CD93Q9NPY3 652 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 TMEM248Q9NWD8 314 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 ZNHIT6Q9NWK9 470 aaKnown RBP10.1□□□□□ -0.79
CD48-202ENST00000368046 HS3ST2Q9Y278 367 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 NCKAP1Q9Y2A7 1128 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.1□□□□□ -0.79
CD48-202ENST00000368046 PTPRZ1P23471 2315 aaPredicted RBP10.09□□□□□ -0.79
CD48-202ENST00000368046 CXorf51AA0A1B0GTR3 108 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 METTL12A8MUP2 240 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 EIF3CLB5ME19 914 aaKnown RBP10.09□□□□□ -0.79
CD48-202ENST00000368046 KHNYNO15037 678 aaKnown RBP10.09□□□□□ -0.79
CD48-202ENST00000368046 MCF2LO15068 1137 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 MT-CO1P00395 513 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 SRCP12931 536 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 ITPKAP23677 461 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 SLC8A1P32418 973 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 HTR7P34969 479 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 ETFBP38117 255 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 EIF4A3P38919 411 aaKnown RBP10.09□□□□□ -0.79
CD48-202ENST00000368046 ID4P47928 161 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 MAPKAPK2P49137 400 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 GNA12Q03113 381 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 PIGHQ14442 188 aaPredicted RBP10.09□□□□□ -0.79
CD48-202ENST00000368046 SF3A2Q15428 464 aaKnown RBP10.09□□□□□ -0.79
CD48-202ENST00000368046 CCDC6Q16204 474 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 WDR45BQ5MNZ6 344 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 ZNF787Q6DD87 383 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 RETSATQ6NUM9 610 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 USP30Q70CQ3 517 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 ARMCX6Q7L4S7 300 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 NLRP14Q86W24 1093 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 MMAAQ8IVH4 418 aaKnown RBP10.09□□□□□ -0.79
CD48-202ENST00000368046 SLC41A1Q8IVJ1 513 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 ARFGAP1Q8N6T3 406 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 C12orf50Q8NA57 414 aaPredicted RBP10.09□□□□□ -0.79
CD48-202ENST00000368046 DCAF4L2Q8NA75 395 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 ATP11CQ8NB49 1132 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 OR7D4Q8NG98 312 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 ZDHHC16Q969W1 377 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 EIF3CQ99613 913 aaKnown RBP10.09□□□□□ -0.79
CD48-202ENST00000368046 EPAS1Q99814 870 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 GPR174Q9BXC1 333 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 ACE2Q9BYF1 805 aaPredicted RBP10.09□□□□□ -0.79
CD48-202ENST00000368046 TRIM5Q9C035 493 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 BTBD1Q9H0C5 482 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 THAP2Q9H0W7 228 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 MAGEH1Q9H213 219 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 TMEM74BQ9NUR3 256 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 NDFIP2Q9NV92 336 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 DONSONQ9NYP3 566 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 DNAI1Q9UI46 699 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 VPS51Q9UID3 782 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 RABGEF1Q9UJ41 708 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 PILRBQ9UKJ0 227 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 EP300Q09472 2414 aaPredicted RBP10.09□□□□□ -0.79
CD48-202ENST00000368046 GPR179Q6PRD1 2367 aa10.09□□□□□ -0.79
CD48-202ENST00000368046 SSU72P8A0A1W2PR75 194 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 WASH4PA8MWX3 477 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 CBX4O00257 560 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 CREB3O43889 395 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 PRPSAP2O60256 369 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 SNAP91O60641 907 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 ZMPSTE24O75844 475 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 IL1BP01584 269 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 CYP1A2P05177 515 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 C5AR1P21730 350 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 EPHB2P29323 1055 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 MIPP30301 263 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 ACSL1P33121 698 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 HOXD12P35452 270 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 PCK1P35558 622 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 GALCP54803 685 aa10.08□□□□□ -0.8
CD48-202ENST00000368046 ADKP55263 362 aaKnown RBP10.08□□□□□ -0.8
CD48-202ENST00000368046 YBEYP58557 167 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms