RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SYT12Q8IV01 421 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 STK40Q8N2I9 435 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 HSPA12BQ96MM6 686 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 PPP1R9BQ96SB3 815 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 EDEM2Q9BV94 578 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 GPR174Q9BXC1 333 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 MUC3BQ9H195 1237 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 ARHGAP20Q9P2F6 1191 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 CNOT8Q9UFF9 292 aaKnown RBP15.65■□□□□ 0.1
PRKN-201ENST00000338468 VPS51Q9UID3 782 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 NENFQ9UMX5 172 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 HS3ST2Q9Y278 367 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 LUC7L2Q9Y383 392 aaKnown RBP15.65■□□□□ 0.1
PRKN-201ENST00000338468 BZW2Q9Y6E2 419 aaKnown RBP15.65■□□□□ 0.1
PRKN-201ENST00000338468 NUMA1Q14980 2115 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 A0A087X0T9 212 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 LNP1A1A4G5 178 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 ILVBLA1L0T0 632 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 ANKRD62A6NC57 917 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 K7ERQ8 282 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 NDUFS2O75306 463 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 ZMPSTE24O75844 475 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 FAM228BP0C875 321 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 HNRNPH3P31942 346 aaKnown RBP15.64■□□□□ 0.09
PRKN-201ENST00000338468 ACSL1P33121 698 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 NOVA1P51513 510 aaKnown RBP15.64■□□□□ 0.09
PRKN-201ENST00000338468 IRX4P78413 519 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 SEMA3BQ13214 749 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 C6orf118Q5T5N4 469 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 SCYL2Q6P3W7 929 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 MMAAQ8IVH4 418 aaKnown RBP15.64■□□□□ 0.09
PRKN-201ENST00000338468 SH2D3CQ8N5H7 860 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 DCAF4L2Q8NA75 395 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 ZNF653Q96CK0 615 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 PABPC3Q9H361 631 aaKnown RBP15.64■□□□□ 0.09
PRKN-201ENST00000338468 TMEM248Q9NWD8 314 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 SERGEFQ9UGK8 458 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 FZD10Q9ULW2 581 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 ZZEF1O43149 2961 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 CHD5Q8TDI0 1954 aa15.64■□□□□ 0.09
PRKN-201ENST00000338468 IGF2RP11717 2491 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 ASPMQ8IZT6 3477 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 C1QTNF9BB2RNN3 333 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 MID1O15344 667 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 SMAD6O43541 496 aaKnown RBP15.63■□□□□ 0.09
PRKN-201ENST00000338468 DNTTP04053 509 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 C1QTNF9P0C862 333 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 SRCP12931 536 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 RHOQP17081 205 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 PSMA2P25787 234 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 L1CAMP32004 1257 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 GNA12Q03113 381 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 DLG2Q15700 870 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 CST6Q15828 149 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 SPECC1LQ69YQ0 1117 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 RWDD4Q6NW29 188 aaKnown RBP15.63■□□□□ 0.09
PRKN-201ENST00000338468 ZNF783Q6ZMS7 281 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 CYP4V2Q6ZWL3 525 aaPredicted RBP15.63■□□□□ 0.09
PRKN-201ENST00000338468 VSTM4Q8IW00 320 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 DRC7Q8IY82 874 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 CADM4Q8NFZ8 388 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 FNIP1Q8TF40 1166 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 TBC1D31Q96DN5 1066 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 PEBP4Q96S96 227 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.63■□□□□ 0.09
PRKN-201ENST00000338468 C6orf106Q9H6K1 298 aaPredicted RBP15.63■□□□□ 0.09
PRKN-201ENST00000338468 EVLQ9UI08 416 aaPredicted RBP15.63■□□□□ 0.09
PRKN-201ENST00000338468 SLC25A13Q9UJS0 675 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 ZMIZ1Q9ULJ6 1067 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.63■□□□□ 0.09
PRKN-201ENST00000338468 SPEGQ15772 3267 aa15.63■□□□□ 0.09
PRKN-201ENST00000338468 ZFYVE26Q68DK2 2539 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 METTL12A8MUP2 240 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 C10orf142B7Z368 130 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 KHNYNO15037 678 aaKnown RBP15.62■□□□□ 0.09
PRKN-201ENST00000338468 CBFA2T2O43439 604 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 CD160O95971 181 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 TPM3P06753 285 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 MYBL1P10243 752 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 MAOBP27338 520 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 SLC8A1P32418 973 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 HOXD12P35452 270 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 ACVRL1P37023 503 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 NNMTP40261 264 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 METAP1P53582 386 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 KRT83P78385 493 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 ARF5P84085 180 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 COL9A2Q14055 689 aaPredicted RBP15.62■□□□□ 0.09
PRKN-201ENST00000338468 ELAVL3Q14576 367 aaKnown RBP15.62■□□□□ 0.09
PRKN-201ENST00000338468 CA9Q16790 459 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 TRIM61Q5EBN2 209 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 EFHC2Q5JST6 749 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 DAB2IPQ5VWQ8 1189 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 LINGO4Q6UY18 593 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 Q6ZVU0 165 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 AADATQ8N5Z0 425 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 DNASE2BQ8WZ79 361 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 DNAJC7Q99615 494 aa15.62■□□□□ 0.09
PRKN-201ENST00000338468 C2orf49Q9BVC5 232 aaPredicted RBP15.62■□□□□ 0.09
PRKN-201ENST00000338468 ACE2Q9BYF1 805 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms