RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TRIOO75962 3097 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 CBX4O00257 560 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 DCNP07585 359 aaKnown RBP14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 DLDP09622 509 aaKnown RBP14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 CXCR5P32302 372 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 KIR2DL1P43626 348 aaPredicted RBP14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 MRPS21P82921 87 aaKnown RBP14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 SLC10A2Q12908 348 aaPredicted RBP14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 SERINC3Q13530 473 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 FNDC3BQ53EP0 1204 aaKnown RBP14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 NPNTQ6UXI9 565 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 BBS12Q6ZW61 710 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 SYNPOQ8N3V7 929 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 ZNF513Q8N8E2 541 aaPredicted RBP14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 CCDC26Q8TAB7 109 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 USP33Q8TEY7 942 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 PBXIP1Q96AQ6 731 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 RPL10LQ96L21 214 aaKnown RBP14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 CARD9Q9H257 536 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 SLC25A13Q9UJS0 675 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 PLA2G4CQ9UP65 541 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 EFR3BQ9Y2G0 817 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 TECTAO75443 2155 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 NUP205Q92621 2012 aa14.4□□□□□ -0.1
APOBEC3B-202ENST00000335760 ZMPSTE24O75844 475 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 TJP3O95049 919 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 MAP3K6O95382 1288 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 SRPRAP08240 638 aaKnown RBP14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 HNRNPLP14866 589 aaKnown RBP eCLIP14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 TGM2P21980 687 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 STK19P49842 368 aaPredicted RBP14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 ARF5P84085 180 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 GALNT2Q10471 571 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 ZNF234Q14588 700 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 E2F5Q15329 346 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 PTPRNQ16849 979 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 CCDC181Q5TID7 509 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 RETSATQ6NUM9 610 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 LINGO4Q6UY18 593 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 LEKR1Q6ZMV7 388 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 ARHGAP36Q6ZRI8 547 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 Q6ZS52 159 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 RPLP0P6Q8NHW5 317 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 KCNV2Q8TDN2 545 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 ACDQ96AP0 544 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 CLDN23Q96B33 292 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 MRGPRX3Q96LB0 322 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 NAPGQ99747 312 aaPredicted RBP14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 DTLQ9NZJ0 730 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 THAP10Q9P2Z0 257 aaPredicted RBP14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 A0A0C4DFX4 3053 aa14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 NYNRINQ9P2P1 1898 aaKnown RBP14.39□□□□□ -0.11
APOBEC3B-202ENST00000335760 MUC3AQ02505 3323 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 NCOR1O75376 2440 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 J3KR12 359 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 PI15O43692 258 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 CEP104O60308 925 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 KLF8O95600 359 aaPredicted RBP14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 CHRM1P11229 460 aaPredicted RBP14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 PECAM1P16284 738 aaPredicted RBP14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 AOC1P19801 751 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 DEKP35659 375 aaKnown RBP14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 WASP42768 502 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 ST8SIA6P61647 398 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 TRMT11Q7Z4G4 463 aaKnown RBP14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 CHPFQ8IZ52 775 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 ATPAF2Q8N5M1 289 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 ALLCQ8N6M5 410 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 HAUS1Q96CS2 278 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 PBKQ96KB5 322 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 ACOX2Q99424 681 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 SP110Q9HB58 689 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 CACNA2D2Q9NY47 1150 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 SAE1Q9UBE0 346 aaPredicted RBP14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 IPO11Q9UI26 975 aaKnown RBP14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 SLCO3A1Q9UIG8 710 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 SNX12Q9UMY4 172 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 ACTL7AQ9Y615 435 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 RAD54BQ9Y620 910 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 BDP1A6H8Y1 2624 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 ATG2BQ96BY7 2078 aa14.38□□□□□ -0.11
APOBEC3B-202ENST00000335760 CTAGE9A4FU28 777 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 FAM86C2PA6NEL3 165 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 ZSCAN5CA6NGD5 496 aaPredicted RBP14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 WASH3PC4AMC7 463 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 APOC4-APOC2K7ER74 178 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 K7ERQ8 282 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 NPC1O15118 1278 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 PRAMEF11O60813 436 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 MT-CO1P00395 513 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 APOC2P02655 101 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 MX2P20592 715 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 NTSR1P30989 418 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 NNMTP40261 264 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 GARSP41250 739 aaKnown RBP14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 IL12RB1P42701 662 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 RPS9P46781 194 aaKnown RBP14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 NR2C2P49116 596 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 CLCN5P51795 746 aa14.37□□□□□ -0.11
APOBEC3B-202ENST00000335760 ETF1P62495 437 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms