RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ARHGEF6Q15052 776 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 PREPLQ4J6C6 727 aaPredicted RBP16.76■□□□□ 0.27
CLIP4-201ENST00000320081 BNIPLQ7Z465 357 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 FAM156AQ8NDB6 213 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 RBM15BQ8NDT2 890 aaKnown RBP16.76■□□□□ 0.27
CLIP4-201ENST00000320081 BHLHE22Q8NFJ8 381 aaPredicted RBP16.76■□□□□ 0.27
CLIP4-201ENST00000320081 MYLPFQ96A32 169 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 TLCD1Q96CP7 247 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 RCN3Q96D15 328 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 ZNF184Q99676 751 aaPredicted RBP16.76■□□□□ 0.27
CLIP4-201ENST00000320081 EGFL7Q9UHF1 273 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 LRCH1Q9Y2L9 728 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 C9IYK1 514 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 MT-ND1P03886 318 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 APOA4P06727 396 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 ATP6V1E1P36543 226 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 GJA9P57773 515 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 PACS1Q6VY07 963 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 TRPC4APQ8TEL6 797 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 DENND2DQ9H6A0 471 aaPredicted RBP16.75■□□□□ 0.27
CLIP4-201ENST00000320081 KCNH4Q9UQ05 1017 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 ALDH2P05091 517 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 TFEBP19484 476 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 SOAT1P35610 550 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 MATKP42679 507 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 PCDH19Q8TAB3 1148 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 CPNE1Q99829 537 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 TBL1YQ9BQ87 522 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 GRIP2Q9C0E4 1043 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 CLPBQ9H078 707 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 ACTR8Q9H981 624 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 SYNPO2Q9UMS6 1093 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 CHKBQ9Y259 395 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.75■□□□□ 0.27
CLIP4-201ENST00000320081 FFAR3O14843 346 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 GPR42O15529 346 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 SLC2A4P14672 509 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 MPSTP25325 297 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 PSMA4P25789 261 aaKnown RBP16.75■□□□□ 0.27
CLIP4-201ENST00000320081 UTS2BQ765I0 119 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 SETD3Q86TU7 594 aaPredicted RBP16.75■□□□□ 0.27
CLIP4-201ENST00000320081 HPS6Q86YV9 775 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 SH3GL3Q99963 347 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 SEMA3CQ99985 751 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 SCUBE2Q9NQ36 999 aa16.75■□□□□ 0.27
CLIP4-201ENST00000320081 METTL18O95568 372 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 RTP1P59025 263 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 PGS1Q32NB8 556 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 WASHC2DQ5SRD0 308 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 GRTP1Q5TC63 336 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 METTL6Q8TCB7 284 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 FIG4Q92562 907 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 FCRL2Q96LA5 508 aaPredicted RBP16.74■□□□□ 0.27
CLIP4-201ENST00000320081 PDZD7Q9H5P4 517 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 ZNF229Q9UJW7 825 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 MYBPHLA2RUH7 354 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 B4GALT4O60513 344 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 MYO1DO94832 1006 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 CPSF4O95639 269 aaKnown RBP16.74■□□□□ 0.27
CLIP4-201ENST00000320081 CYP1A1P04798 512 aaPredicted RBP16.74■□□□□ 0.27
CLIP4-201ENST00000320081 SLC2A3P11169 496 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 PCNAP12004 261 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 POU1F1P28069 291 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 GALNT3Q14435 633 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 NEDD8Q15843 81 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 NFE2Q16621 373 aaPredicted RBP16.74■□□□□ 0.27
CLIP4-201ENST00000320081 RNF43Q68DV7 783 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 MICU2Q8IYU8 434 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 FBXO39Q8N4B4 442 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 CATSPER1Q8NEC5 780 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 HDAC10Q969S8 669 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 RNF145Q96MT1 663 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 RHOBTB2Q9BYZ6 727 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 RNF39Q9H2S5 420 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 FARP1Q9Y4F1 1045 aaPredicted RBP16.74■□□□□ 0.27
CLIP4-201ENST00000320081 ABCB1P08183 1280 aaPredicted RBP16.74■□□□□ 0.27
CLIP4-201ENST00000320081 PLPPR4Q7Z2D5 763 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 PARP8Q8N3A8 854 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 MPP5Q8N3R9 675 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 ESAMQ96AP7 390 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 C1orf50Q9BV19 199 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 WDR41Q9HAD4 459 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 KCNK4Q9NYG8 393 aa16.74■□□□□ 0.27
CLIP4-201ENST00000320081 ZNF839A8K0R7 811 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 PTGES3LE9PB15 166 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 TK2O00142 265 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 ME2P23368 584 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 CNTFP26441 200 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 YWHAQP27348 245 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 PGGT1BP53609 377 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 CCL23P55773 120 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 MRPS5P82675 430 aaKnown RBP16.73■□□□□ 0.27
CLIP4-201ENST00000320081 ZIK1Q3SY52 487 aaPredicted RBP16.73■□□□□ 0.27
CLIP4-201ENST00000320081 MSS51Q4VC12 460 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 C9orf57Q5W0N0 161 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 ZNF410Q86VK4 478 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 PHACTR1Q9C0D0 580 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 VPS45Q9NRW7 570 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 FBXO5Q9UKT4 447 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 IPPQ9Y573 584 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms