RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 AZIN2Q96A70 460 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 ZNF333Q96JL9 665 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 ZNF778Q96MU6 729 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 MANSC1Q9H8J5 431 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 ACSS2Q9NR19 701 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 TMEM161AQ9NX61 479 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 TAS2R1Q9NYW7 299 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 PPARGC1AQ9UBK2 798 aaKnown RBP7.78□□□□□ -1.16
TRIM55-202ENST00000315962 TNFRSF10BO14763 440 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 GSC2O15499 205 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 TROVE2P10155 538 aaKnown RBP eCLIP7.77□□□□□ -1.17
TRIM55-202ENST00000315962 ERVK-10P10266 1014 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 SAT1P21673 171 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 NKX3-2P78367 333 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 DPYSQ14117 519 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 PCSK7Q16549 785 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 C10orf120Q5SQS8 335 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 RASIP1Q5U651 963 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 CES4AQ5XG92 561 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 KIAA1841Q6NSI8 718 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 UNC5AQ6ZN44 842 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 LRRC74BQ6ZQY2 392 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 TREML1Q86YW5 311 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 CDKL3Q8IVW4 592 aaPredicted RBP7.77□□□□□ -1.17
TRIM55-202ENST00000315962 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.77□□□□□ -1.17
TRIM55-202ENST00000315962 CFAP61Q8NHU2 1237 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 MYEOVQ96EZ4 313 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 KLHL5Q96PQ7 755 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 MARCH5Q9NX47 278 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 LRRC42Q9Y546 428 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 TEX264Q9Y6I9 313 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 TRIOO75962 3097 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 B2RBV5 119 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 FCHO1O14526 889 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 DCLK1O15075 740 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 DGKIO75912 1065 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 CNTN5O94779 1100 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 FBXO21O94952 628 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 CYP11A1P05108 521 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 GALTP07902 379 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 ETFBP38117 255 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 CDK7P50613 346 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 PAPOLAP51003 745 aaKnown RBP7.77□□□□□ -1.17
TRIM55-202ENST00000315962 KCNQ1P51787 676 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 UBAP2LQ14157 1087 aaKnown RBP7.77□□□□□ -1.17
TRIM55-202ENST00000315962 PARP6Q2NL67 630 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 EML3Q32P44 896 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 CERCAMQ5T4B2 595 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 FUT10Q6P4F1 479 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 ARID3BQ8IVW6 561 aaPredicted RBP7.77□□□□□ -1.17
TRIM55-202ENST00000315962 GRAMD1AQ96CP6 724 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 OLFM3Q96PB7 478 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 THTPAQ9BU02 230 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 UNKQ9C0B0 810 aaKnown RBP7.77□□□□□ -1.17
TRIM55-202ENST00000315962 FAM124BQ9H5Z6 455 aaPredicted RBP7.77□□□□□ -1.17
TRIM55-202ENST00000315962 PSAT1Q9Y617 370 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 SPEGQ15772 3267 aa7.77□□□□□ -1.17
TRIM55-202ENST00000315962 A0A0A0MRY4 1105 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 ZMPSTE24O75844 475 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 PSMG1O95456 288 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 MT-ND3P03897 115 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 INHBAP08476 426 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 CSH1P0DML2 217 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 CSH2P0DML3 217 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 SKIP12755 728 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 CSF2RAP15509 400 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 PTPN3P26045 913 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 PGM1P36871 562 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 SKIV2L2P42285 1042 aaKnown RBP7.76□□□□□ -1.17
TRIM55-202ENST00000315962 CXCR3P49682 368 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 ATXN3P54252 364 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-202ENST00000315962 FAM189BP81408 668 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 ITKQ08881 620 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 CCDC15Q0P6D6 951 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 BFSP2Q13515 415 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 ALFQ53S48 1182 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 PM20D1Q6GTS8 502 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 IZUMO2Q6UXV1 221 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 PYDC1Q8WXC3 89 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 SEPT8Q92599 483 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 FBXO32Q969P5 355 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 MFSD3Q96ES6 412 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 SPATA13Q96N96 652 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 QKIQ96PU8 341 aaKnown RBP eCLIP7.76□□□□□ -1.17
TRIM55-202ENST00000315962 EBF4Q9BQW3 602 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 BTBD10Q9BSF8 475 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 TRIM55Q9BYV6 548 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 NACA2Q9H009 215 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 CYP4F11Q9HBI6 524 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 GKN1Q9NS71 199 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.76□□□□□ -1.17
TRIM55-202ENST00000315962 SMPD4Q9NXE4 827 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 DSEQ9UL01 958 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 PCDHB8Q9UN66 801 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 A0A0C4DFX4 3053 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 PRPF4O43172 522 aaKnown RBP eCLIP7.76□□□□□ -1.17
TRIM55-202ENST00000315962 PMPCBO75439 489 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 TCEA3O75764 348 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 PDE5AO76074 875 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 OAZ2O95190 189 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms