RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 CPT1AP50416 773 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 FBXW4P57775 412 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 LIPMQ5VYY2 423 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 C11orf74Q86VG3 221 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 MIB1Q86YT6 1006 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 SPPL2AQ8TCT8 520 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 GIPC3Q8TF64 312 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 C7orf26Q96N11 449 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 MECRQ9BV79 373 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 NMUR2Q9GZQ4 415 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 HPS4Q9NQG7 708 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 ADPRHL2Q9NX46 363 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 FAM220BPB1ANY3 271 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 RECQL5O94762 991 aaPredicted RBP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 SPATA31C1P0DKV0 1188 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 CDH18Q13634 790 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 ECM1Q16610 540 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 C15orf59Q2T9L4 293 aaPredicted RBP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 LPCAT4Q643R3 524 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 ZNF605Q86T29 641 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 EFCAB3Q8N7B9 438 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 B3GALNT2Q8NCR0 500 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 ZNF670Q9BS34 389 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 MAN1C1Q9NR34 630 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 RAB26Q9ULW5 256 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 PLA2G4CQ9UP65 541 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 PLLPQ9Y342 182 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 SH3BP1Q9Y3L3 701 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 GNG14A0A1W2PPG7 69 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 FAM25AB3EWG3 89 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 FAM25CB3EWG5 89 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 FAM25GB3EWG6 89 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 RGL2O15211 777 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 YBX3P16989 372 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 YY1P25490 414 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 SLC16A1P53985 500 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 CDC16Q13042 620 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 SLC1A5Q15758 541 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 NECAB2Q7Z6G3 386 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 DDX53Q86TM3 631 aaKnown RBP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 C10orf107Q8IVU9 208 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 C12orf50Q8NA57 414 aaPredicted RBP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 SLC44A1Q8WWI5 657 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 DHX33Q9H6R0 707 aaKnown RBP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 CDH9Q9ULB4 789 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 GRIN2DO15399 1336 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 C17orf102A2RUQ5 167 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 TRAFD1O14545 582 aaPredicted RBP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 SEC22BO75396 215 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 KCNH1O95259 989 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 MAGEA10P43363 369 aaPredicted RBP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 NEPROQ6NW34 567 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 TLK2Q86UE8 772 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 RBM15BQ8NDT2 890 aaKnown RBP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 BTN2A2Q8WVV5 523 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 FBXO32Q969P5 355 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 ZBED2Q9BTP6 218 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 ACE2Q9BYF1 805 aaPredicted RBP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 PORCNQ9H237 461 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 DDX4Q9NQI0 724 aaKnown RBP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 SLC12A4Q9UP95 1085 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 INVSQ9Y283 1065 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 CENPXA8MT69 81 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 SMIM22K7EJ46 135 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 RGS14O43566 566 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 NBNO60934 754 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 ASS1P00966 412 aaKnown RBP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 ITGA1P56199 1179 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 RPL7AP62424 266 aaKnown RBP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 CRADDP78560 199 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 GPR107Q5VW38 600 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 MILR1Q7Z6M3 343 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 C12orf56Q8IXR9 622 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 HGH1Q9BTY7 390 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 ARHGEF3Q9NR81 526 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 USP20Q9Y2K6 914 aa13.04□□□□□ -0.32
COL3A1-201ENST00000304636 HBS1LQ9Y450 684 aaKnown RBP13.04□□□□□ -0.32
COL3A1-201ENST00000304636 LYPLA1O75608 230 aaPredicted RBP13.03□□□□□ -0.32
COL3A1-201ENST00000304636 CRHR1P34998 444 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 HALP42357 657 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 ZNF846Q147U1 533 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 ARSHQ5FYA8 562 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 CYP4Z2PQ8N1L4 340 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 CAMKK2Q96RR4 588 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 PCDHB18PQ96TA0 734 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 OLFM1Q99784 485 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 FANCEQ9HB96 536 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 POPDC2Q9HBU9 364 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 DDX43Q9NXZ2 648 aaKnown RBP13.03□□□□□ -0.32
COL3A1-201ENST00000304636 BTBD3Q9Y2F9 522 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 TMEM131LA2VDJ0 1609 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 PIAS1O75925 651 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 EIF2S1P05198 315 aaKnown RBP13.03□□□□□ -0.32
COL3A1-201ENST00000304636 CDH3P22223 829 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 NAA20P61599 178 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 CASP12Q6UXS9 341 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 SLC41A1Q8IVJ1 513 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 AMER2Q8N7J2 671 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 DEPDC7Q96QD5 511 aa13.03□□□□□ -0.32
COL3A1-201ENST00000304636 HSD17B14Q9BPX1 270 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms