RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 PCK1P35558 622 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 RWDD2BP57060 319 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 CTAGE6Q86UF2 777 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 SCUBE3Q8IX30 993 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 CTAGE4Q8IX94 777 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 ACTRT1Q8TDG2 376 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 COG1Q8WTW3 980 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 COL26A1Q96A83 441 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 BTBD6Q96KE9 485 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 BBC3Q96PG8 261 aaPredicted RBP21.69■■□□□ 1.06
SMCO4-201ENST00000298966 NACA2Q9H009 215 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 CD93Q9NPY3 652 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 PACSIN2Q9UNF0 486 aaPredicted RBP21.69■■□□□ 1.06
SMCO4-201ENST00000298966 LOC400499M0QZD8 3231 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 DYNC1I1O14576 645 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 DAB1O75553 588 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 GABBR2O75899 941 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 BEST1O76090 585 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 KRT7P08729 469 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 CETN2P41208 172 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 TUBP50607 506 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 PM20D1Q6GTS8 502 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 RSRC2Q7L4I2 434 aaKnown RBP21.68■■□□□ 1.06
SMCO4-201ENST00000298966 RASGEF1CQ8N431 466 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 LRRN4CLQ8ND94 238 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 JOSD2Q8TAC2 188 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 GOLGA1Q92805 767 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 MRGPRX1Q96LB2 322 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 SLC6A17Q9H1V8 727 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 FBXO44Q9H4M3 255 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 CCSER2Q9H7U1 834 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 DDX56Q9NY93 547 aaKnown RBP21.68■■□□□ 1.06
SMCO4-201ENST00000298966 DKK4Q9UBT3 224 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 STAP1Q9ULZ2 295 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 RAD54BQ9Y620 910 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 USP3Q9Y6I4 520 aa21.68■■□□□ 1.06
SMCO4-201ENST00000298966 SMG1Q96Q15 3661 aaKnown RBP21.67■■□□□ 1.06
SMCO4-201ENST00000298966 NEDD8-MDP1E9PL57 170 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 ZNF185O15231 689 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 ZBED1O96006 694 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 PDGFRAP16234 1089 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 CD6P30203 668 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 PEX5P50542 639 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 DAOAP59103 153 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 YWHAZP63104 245 aaKnown RBP21.67■■□□□ 1.06
SMCO4-201ENST00000298966 SEL1L2Q5TEA6 688 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 SNX30Q5VWJ9 437 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 TMPRSS7Q7RTY8 843 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 KATNAL2Q8IYT4 538 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 RXFP2Q8WXD0 754 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 DNASE2BQ8WZ79 361 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 WBP2Q969T9 261 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 CAPZA3Q96KX2 299 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 BBS2Q9BXC9 721 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 TRIM7Q9C029 511 aa21.67■■□□□ 1.06
SMCO4-201ENST00000298966 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.67■■□□□ 1.06
SMCO4-201ENST00000298966 GFRA2O00451 464 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 CACNG3O60359 315 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 CER1O95813 267 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 ZNF883P0CG24 379 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 TYRP14679 529 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 CXCR5P32302 372 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 NOS2P35228 1153 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 MATKP42679 507 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 OGDHQ02218 1023 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 STRADAQ7RTN6 431 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 ARHGAP18Q8N392 663 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 ZCCHC9Q8N567 271 aaKnown RBP21.66■■□□□ 1.06
SMCO4-201ENST00000298966 UBXN4Q92575 508 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 KCNK16Q96T55 309 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 ULBP1Q9BZM6 244 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 MIR1-1HGQ9H1L0 117 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 GAREM1Q9H706 876 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 POPDC2Q9HBU9 364 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 CACNA2D2Q9NY47 1150 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 KNL1Q8NG31 2342 aa21.66■■□□□ 1.06
SMCO4-201ENST00000298966 PRRT4C9JH25 899 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 PGRMC1O00264 195 aaKnown RBP21.65■■□□□ 1.06
SMCO4-201ENST00000298966 GJB6O95452 261 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 NCAM1P13591 858 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 STARD3Q14849 445 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 PPP2R5EQ16537 467 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 METTL3Q86U44 580 aaKnown RBP21.65■■□□□ 1.06
SMCO4-201ENST00000298966 EXD1Q8NHP7 514 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 SCAMP5Q8TAC9 235 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 MAIP1Q8WWC4 291 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 TOE1Q96GM8 510 aaKnown RBP21.65■■□□□ 1.06
SMCO4-201ENST00000298966 RBM41Q96IZ5 413 aaKnown RBP21.65■■□□□ 1.06
SMCO4-201ENST00000298966 SLC2A13Q96QE2 648 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 TBCBQ99426 244 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 PSMB7Q99436 277 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 CDC6Q99741 560 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 GPR174Q9BXC1 333 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 TM7SF3Q9NS93 570 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 GMIPQ9P107 970 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 CABIN1Q9Y6J0 2220 aa21.65■■□□□ 1.06
SMCO4-201ENST00000298966 PDE2AO00408 941 aaPredicted RBP21.64■■□□□ 1.05
SMCO4-201ENST00000298966 PIK3R2O00459 728 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 CEP104O60308 925 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 ZIC2O95409 532 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms