RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TRIM39Q9HCM9 518 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 FBXO6Q9NRD1 293 aaPredicted RBP11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 THAP1Q9NVV9 213 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 JAK1P23458 1154 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 FASP25445 335 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 PSMB9P28065 219 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 KCNK10P57789 538 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 COL9A3Q14050 684 aaPredicted RBP11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 FUT11Q495W5 492 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 ECHDC2Q86YB7 292 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 CCDC33Q8N5R6 958 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 CCDC28BQ9BUN5 200 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 CHST7Q9NS84 486 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 DNAAF2Q9NVR5 837 aaKnown RBP11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 PLA2G4CQ9UP65 541 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 SHOC2Q9UQ13 582 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 HEATR9A2RTY3 570 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 MAP3K13O43283 966 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 MAP3K6O95382 1288 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 CDH24Q86UP0 819 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 SNX32Q86XE0 403 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 ZNF398Q8TD17 642 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 SNX19Q92543 992 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 PTPRN2Q92932 1015 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 FAM162AQ96A26 154 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 EMID1Q96A84 441 aaPredicted RBP11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 CORO1BQ9BR76 489 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 ACTL7BQ9Y614 415 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 BAZ2BQ9UIF8 2168 aaKnown RBP11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 KLHL33A6NCF5 533 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 PRR23D1E9PI22 279 aaPredicted RBP11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 SYN3O14994 580 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 FKBP9O95302 570 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 ARIH2O95376 493 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 PRR23D2P0DMB1 279 aaPredicted RBP11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 UQCRBP14927 111 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 POLD3Q15054 466 aaPredicted RBP11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 WSCD1Q658N2 575 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 FKBP9P1Q75LS8 142 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 ELMO2Q96JJ3 720 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 SERPINB11Q96P15 392 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 RAD21L1Q9H4I0 556 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 HACD3Q9P035 362 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 DMTF1Q9Y222 760 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 SQORQ9Y6N5 450 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 C15orf38-AP3S2A0A0A6YYH1 394 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 UBA6A0AVT1 1052 aaPredicted RBP11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 GSC2O15499 205 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 ZNF862O60290 1169 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 GRAP2O75791 330 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 ZNF865P0CJ78 1059 aaPredicted RBP11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 CYP11B1P15538 503 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 PTPN1P18031 435 aaKnown RBP11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 FGFR3P22607 806 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 TTKP33981 857 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 CCNFP41002 786 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 SLC1A6P48664 564 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 CDK7P50613 346 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 CHRNB3Q05901 458 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 GTF2H3Q13889 308 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 ARHGEF7Q14155 803 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 TAF5Q15542 800 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 BOLA3Q53S33 107 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 ARMCX4Q5H9R4 360 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 ARPINQ7Z6K5 226 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 DDX60Q8IY21 1712 aaKnown RBP11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 SPPL2BQ8TCT7 592 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 FNIP1Q8TF40 1166 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 PTPN18Q99952 460 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 EPS8L2Q9H6S3 715 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 IL23AQ9NPF7 189 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 ADAM28Q9UKQ2 775 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 ADAMTS5Q9UNA0 930 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 TRIM24O15164 1050 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 NFICP08651 508 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 ACADMP11310 421 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 ATP6V1E1P36543 226 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 DRG2P55039 364 aaKnown RBP11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 FAAP100Q0VG06 881 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 RBBP7Q16576 425 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 AGKQ53H12 422 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 HDDC2Q7Z4H3 204 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 KDELC2Q7Z4H8 507 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 LUZP2Q86TE4 346 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 ULK2Q8IYT8 1036 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 FBXW8Q8N3Y1 598 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 RMDN1Q96DB5 314 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 MAGED4Q96JG8 741 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 MBOAT7Q96N66 472 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 ARHGEF38Q9NXL2 777 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 USP20Q9Y2K6 914 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 AP4B1Q9Y6B7 739 aa11.56□□□□□ -0.56
NPC1L1-201ENST00000289547 EDF1O60869 148 aaKnown RBP11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 ALOX12P18054 663 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 ELK3P41970 407 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 ORC1Q13415 861 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 CCDC142Q17RM4 750 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 TFDP3Q5H9I0 405 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 KCNT1Q5JUK3 1230 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms