RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 NRF1Q16656 503 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 SLC25A52Q3SY17 297 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.3□□□□□ -0.92
MSH4-201ENST00000263187 LIN52Q52LA3 116 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 C6orf52Q5T4I8 152 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 TAPT1Q6NXT6 567 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 TIFABQ6ZNK6 161 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 ARRDC4Q8NCT1 418 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 ICA1LQ8NDH6 482 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 VPS39Q96JC1 886 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 SNX27Q96L92 541 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 RBBP8Q99708 897 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 GORASP1Q9BQQ3 440 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 VAPBO95292 243 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 PMLP29590 882 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 GRM5P41594 1212 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 ALDH1A3P47895 512 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 FLOT2Q14254 428 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 TLR1Q15399 786 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 CMPK2Q5EBM0 449 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 SPATA24Q86W54 205 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 ST13P4Q8IZP2 240 aaPredicted RBP9.3□□□□□ -0.92
MSH4-201ENST00000263187 B3GALNT2Q8NCR0 500 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 BHLHE22Q8NFJ8 381 aaPredicted RBP9.3□□□□□ -0.92
MSH4-201ENST00000263187 IPMKQ8NFU5 416 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 ACTRT2Q8TDY3 377 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 HASPINQ8TF76 798 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 CENPIQ92674 756 aaPredicted RBP9.3□□□□□ -0.92
MSH4-201ENST00000263187 C11orf84Q9BUA3 381 aaPredicted RBP9.3□□□□□ -0.92
MSH4-201ENST00000263187 MLPHQ9BV36 600 aaPredicted RBP9.3□□□□□ -0.92
MSH4-201ENST00000263187 ACE2Q9BYF1 805 aaPredicted RBP9.3□□□□□ -0.92
MSH4-201ENST00000263187 TMEM30AQ9NV96 361 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 DDX18Q9NVP1 670 aaKnown RBP9.3□□□□□ -0.92
MSH4-201ENST00000263187 ADA2Q9NZK5 511 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 PDP2Q9P2J9 529 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 TLK1Q9UKI8 766 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 DTNAQ9Y4J8 743 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 A0A0G2JLL6 359 aaPredicted RBP9.3□□□□□ -0.92
MSH4-201ENST00000263187 C9JVG2 144 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 TRIM13O60858 407 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 UQCRBP14927 111 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 GRK2P25098 689 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 CD68P34810 354 aaPredicted RBP9.3□□□□□ -0.92
MSH4-201ENST00000263187 SLC26A2P50443 739 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 LAMC2Q13753 1193 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 SEPT6Q14141 434 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 PCSK7Q16549 785 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 NOL9Q5SY16 702 aaKnown RBP9.3□□□□□ -0.92
MSH4-201ENST00000263187 KIAA0319Q5VV43 1072 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 FAM91A1Q658Y4 838 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 STEAP4Q687X5 459 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 SLC27A1Q6PCB7 646 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 PRRT2Q7Z6L0 340 aaPredicted RBP9.3□□□□□ -0.92
MSH4-201ENST00000263187 DPP9Q86TI2 863 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 DSELQ8IZU8 1212 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 CDCA5Q96FF9 252 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 NDNQ99608 321 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 SPATA16Q9BXB7 569 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 PCDHAC1Q9H158 963 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 LRRC40Q9H9A6 602 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 MKS1Q9NXB0 559 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 GTSE1Q9NYZ3 720 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 SLC2A6Q9UGQ3 507 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 SLC4A7Q9Y6M7 1214 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 SIP14410 1827 aa9.3□□□□□ -0.92
MSH4-201ENST00000263187 SF3B1O75533 1304 aaKnown RBP eCLIP9.29□□□□□ -0.92
MSH4-201ENST00000263187 DNAJC25-GNG10A0A024R161 153 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 ZCWPW2A0A1B0GU75 182 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 TTC24A2A3L6 582 aaPredicted RBP9.29□□□□□ -0.92
MSH4-201ENST00000263187 C9IYK1 514 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 H3BNX3 289 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 AURKAO14965 403 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 PMPCBO75439 489 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 SLC25A27O95847 323 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 GSTA2P09210 222 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 SMPD1P17405 629 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 DPP6P42658 865 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 SERPINB8P50452 374 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CDK7P50613 346 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 GJA9P57773 515 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CNGA3Q16281 694 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 PITRM1Q5JRX3 1037 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 EPGNQ6UW88 154 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CYP2R1Q6VVX0 501 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CPNE1Q99829 537 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 FERMT1Q9BQL6 677 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 GRIP2Q9C0E4 1043 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 ILKAPQ9H0C8 392 aaPredicted RBP9.29□□□□□ -0.92
MSH4-201ENST00000263187 C1orf21Q9H246 121 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CHST12Q9NRB3 414 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 UBAP1Q9NZ09 502 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 GMPR2Q9P2T1 348 aaKnown RBP9.29□□□□□ -0.92
MSH4-201ENST00000263187 MTF2Q9Y483 593 aaPredicted RBP9.29□□□□□ -0.92
MSH4-201ENST00000263187 PAPPA2Q9BXP8 1791 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 C15orf38-AP3S2A0A0A6YYH1 394 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 ATP6AP2A0A1C7CYW4 349 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CCNT2O60583 730 aaKnown RBP9.29□□□□□ -0.92
MSH4-201ENST00000263187 ATP6AP2O75787 350 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 TFEBP19484 476 aa9.29□□□□□ -0.92
MSH4-201ENST00000263187 CNTFP26441 200 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms