RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PDGFBP01127 241 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 TUBB4AP04350 444 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 TYMPP19971 482 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 STAT1P42224 750 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 NEK3P51956 506 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 TUBB4BP68371 445 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 CCNA1P78396 465 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 AMPD3Q01432 767 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 PCBP1Q15365 356 aaKnown RBP eCLIP5.79□□□□□ -1.481e-9■■■■■ 54.6
TOPBP1-201ENST00000260810 FAM160B1Q5W0V3 765 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 DCLRE1AQ6PJP8 1040 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 VPS36Q86VN1 386 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 FAM114A1Q8IWE2 563 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 EXD1Q8NHP7 514 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 HAUS1Q96CS2 278 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 CDC42EP4Q9H3Q1 356 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 DNAJC17Q9NVM6 304 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 HAUS2Q9NVX0 235 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 FNIP2Q9P278 1114 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 CNOT1A5YKK6 2376 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 FREM1Q5H8C1 2179 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 UQCRHLA0A096LP55 91 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 UQCRHP07919 91 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 CDKN2DP55273 166 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 WNT3AP56704 352 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 CETN1Q12798 172 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 USP4Q13107 963 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 SEMA5AQ13591 1074 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 SLC29A2Q14542 456 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 DCAF4L1Q3SXM0 396 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 PYCR3Q53H96 274 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 PPM1JQ5JR12 505 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 AFTPHQ6ULP2 937 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 TSPYL5Q86VY4 417 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 VSIG1Q86XK7 387 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 CNTN4Q8IWV2 1026 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 CD302Q8IX05 232 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 SPEM1Q8N4L4 309 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 ERMNQ8TAM6 284 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 ARHGEF2Q92974 986 aaKnown RBP5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 PTERQ96BW5 349 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 UBXN10Q96LJ8 280 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 SLC17A7Q9P2U7 560 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 SLCO3A1Q9UIG8 710 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 TCEA3O75764 348 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 VIMP08670 466 aaKnown RBP5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 ATP2A2P16615 1042 aaKnown RBP5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 GSDMDP57764 484 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 TRAF2Q12933 501 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 E2F2Q14209 437 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 TANGO2Q6ICL3 276 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 CNKSR3Q6P9H4 555 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 CES3Q6UWW8 571 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 TSPAN33Q86UF1 283 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 NT5DC4Q86YG4 428 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 TCP11Q8WWU5 503 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 TAF4BQ92750 862 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 ASB16Q96NS5 453 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 QKIQ96PU8 341 aaKnown RBP eCLIP5.78□□□□□ -1.483e-11■■■■□ 21.5
TOPBP1-201ENST00000260810 KRT12Q99456 494 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 CCDC94Q9BW85 323 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 C2orf40Q9H1Z8 148 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 SLCO1B3Q9NPD5 702 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 PLK4O00444 970 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 CCDC175P0C221 793 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 EPB41P11171 864 aaKnown RBP5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 ADORA2BP29275 332 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 MMP13P45452 471 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 SOX9P48436 509 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 SPARCL1Q14515 664 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 CTSL3PQ5NE16 218 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 STRADAQ7RTN6 431 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 LGR4Q9BXB1 951 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 OSBPL8Q9BZF1 889 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 LHX9Q9NQ69 397 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 PRAMEF25A6NGN4 478 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 NPIPB8E9PQR5 432 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 RSL1D1O76021 490 aaKnown RBP5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 LTFP02788 710 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 FAM163BP0C2L3 166 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 CASP8Q14790 479 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 RIPOR1Q6ZS17 1223 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 COMTD1Q86VU5 262 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 ZNF677Q86XU0 584 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 PLPP6Q8IY26 295 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 APPL2Q8NEU8 664 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 CENPTQ96BT3 561 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 MIPEPQ99797 713 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 HERC2P3Q9BVR0 1158 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 NT5C1AQ9BXI3 368 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 SAR1BQ9Y6B6 198 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 RTTNQ86VV8 2226 aa5.78□□□□□ -1.48
TOPBP1-201ENST00000260810 TCRBV9S1A1TA0A576 114 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 BCLAF3A2AJT9 711 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 FADS2P1A8MWK0 482 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 HTRA2O43464 458 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 DKC1O60832 514 aaKnown RBP eCLIP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 B4GALT2O60909 372 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 ASMTLO95671 621 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms