RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 LRRC52Q8N7C0 313 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 FNDC8Q8TC99 324 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 TSPAN17Q96FV3 270 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 HSFY1Q96LI6 401 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 TRNAU1APQ9NX07 287 aaKnown RBP11.18□□□□□ -0.62
COPA-201ENST00000241704 WARS2Q9UGM6 360 aaKnown RBP11.18□□□□□ -0.62
COPA-201ENST00000241704 DAPK2Q9UIK4 370 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 ZNF112Q9UJU3 913 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 GRID1Q9ULK0 1009 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 AAR2Q9Y312 384 aaKnown RBP11.18□□□□□ -0.62
COPA-201ENST00000241704 AP4B1Q9Y6B7 739 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 FAM237BA0A1B0GVD1 139 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 GSTA4O15217 222 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 SPTLC1O15269 473 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 ADH1AP07327 375 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 ZNF12P17014 697 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 CD97P48960 835 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 MARCKSL1P49006 195 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 HIRAP54198 1017 aaPredicted RBP11.18□□□□□ -0.62
COPA-201ENST00000241704 GEMP55040 296 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 MAP3K10Q02779 954 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 PRKCZQ05513 592 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 CLPTM1LQ96KA5 538 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 LRRC4CQ9HCJ2 640 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 DNALI1O14645 258 aaPredicted RBP11.18□□□□□ -0.62
COPA-201ENST00000241704 MYO1DO94832 1006 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 OR6B1O95007 311 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 CCDC130P13994 396 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 PTPN1P18031 435 aaKnown RBP11.18□□□□□ -0.62
COPA-201ENST00000241704 RPL26P61254 145 aaKnown RBP11.18□□□□□ -0.62
COPA-201ENST00000241704 SPIDRQ14159 915 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 KCNA10Q16322 511 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 TIGD7Q6NT04 549 aaPredicted RBP11.18□□□□□ -0.62
COPA-201ENST00000241704 TTC33Q6PID6 262 aaPredicted RBP11.18□□□□□ -0.62
COPA-201ENST00000241704 TRIM48Q8IWZ4 208 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 TMCO5AQ8N6Q1 288 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 CHST7Q9NS84 486 aa11.18□□□□□ -0.62
COPA-201ENST00000241704 TRIM49D1C9J1S8 452 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 CBX4O00257 560 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 DHX15O43143 795 aaKnown RBP11.17□□□□□ -0.62
COPA-201ENST00000241704 IDO1P14902 403 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 CCR1P32246 355 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 IFNA8P32881 189 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 NDUFV1P49821 464 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 ATXN3P54252 364 aaPredicted RBP11.17□□□□□ -0.62
COPA-201ENST00000241704 RHOAP61586 193 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 IL1RL1Q01638 556 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 ZRANB3Q5FWF4 1079 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 DLK2Q6UY11 383 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 TSPAN18Q96SJ8 248 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 WRAP73Q9P2S5 460 aaPredicted RBP11.17□□□□□ -0.62
COPA-201ENST00000241704 CLCA2Q9UQC9 943 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 MRPS23Q9Y3D9 190 aaKnown RBP11.17□□□□□ -0.62
COPA-201ENST00000241704 ZNF839A8K0R7 811 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 APOC4-APOC2K7ER74 178 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 SEC24DO94855 1032 aaPredicted RBP11.17□□□□□ -0.62
COPA-201ENST00000241704 APOC2P02655 101 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 C4BPAP04003 597 aaKnown RBP11.17□□□□□ -0.62
COPA-201ENST00000241704 HOXD12P35452 270 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 RAP1GDS1P52306 607 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 OTOP2Q7RTS6 562 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 POU5F2Q8N7G0 328 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 NMUR2Q9GZQ4 415 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 C6orf203Q9P0P8 240 aaPredicted RBP11.17□□□□□ -0.62
COPA-201ENST00000241704 DNPEPQ9ULA0 475 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 SORCS3Q9UPU3 1222 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 CAPN8A6NHC0 703 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 GNGT2O14610 69 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 AIM2O14862 343 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 CLASP2O75122 1294 aaKnown RBP11.17□□□□□ -0.62
COPA-201ENST00000241704 CPA3P15088 417 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 BDNFP23560 247 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 KDELR1P24390 212 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 SERPINB1P30740 379 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 NOVP48745 357 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 NR2C2P49116 596 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 RGS4P49798 205 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 SLC25A3Q00325 362 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 MROH9Q5TGP6 573 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 WSCD1Q658N2 575 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 ZFP1Q6P2D0 407 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 ERI1Q8IV48 349 aaKnown RBP11.17□□□□□ -0.62
COPA-201ENST00000241704 C7orf61Q8IZ16 206 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 DAW1Q8N136 415 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 NRG4Q8WWG1 115 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 FAM84AQ96KN4 292 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 POPDC2Q9HBU9 364 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 PLK2Q9NYY3 685 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 DERAQ9Y315 318 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 FGBP02675 491 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 C4BP0C0L5 1744 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 DARSP14868 501 aaKnown RBP11.17□□□□□ -0.62
COPA-201ENST00000241704 PEX2P28328 305 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 TBX4P57082 545 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 MOGSQ13724 837 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 ALYREFQ86V81 257 aaKnown RBP11.17□□□□□ -0.62
COPA-201ENST00000241704 PDSS2Q86YH6 399 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 IFNL1Q8IU54 200 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 CCDC33Q8N5R6 958 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 DIS3LQ8TF46 1054 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms