RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 PCDH9Q9HC56 1237 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 LATS2Q9NRM7 1088 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 ARHGEF38Q9NXL2 777 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 ZNF212Q9UDV6 495 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 A0A1W2PRU2 124 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 SLC38A8A6NNN8 435 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 PDE2AO00408 941 aaPredicted RBP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 FGF10O15520 208 aaPredicted RBP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 TRIM16O95361 564 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 POLR2EP19388 210 aaKnown RBP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 CORO1AP31146 461 aaKnown RBP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 GJA8P48165 433 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 POU6F1Q14863 301 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 TRIP10Q15642 601 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 RFWD3Q6PCD5 774 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 PIK3R5Q8WYR1 880 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 NSL1Q96IY1 281 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 EXOC2Q96KP1 924 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 LGMNQ99538 433 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 FAM129AQ9BZQ8 928 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 PAPOLBQ9NRJ5 636 aaKnown RBP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 SEPT3Q9UH03 358 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 CRLS1Q9UJA2 301 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 YIPF1Q9Y548 306 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 CPQQ9Y646 472 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 SDR42E2A6NKP2 422 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 C2orf81A6NN90 581 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 DDX5P17844 614 aaKnown RBP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 UGP2Q16851 508 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 FASTKD1Q53R41 847 aaKnown RBP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 TPGS2Q68CL5 300 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 TAC4Q86UU9 113 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 RAB42Q8N4Z0 105 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 HDAC7Q8WUI4 952 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 KLF6Q99612 283 aaPredicted RBP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 EGFL8Q99944 293 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 FRMD8Q9BZ67 464 aaPredicted RBP9.59□□□□□ -0.87
CCDC113-201ENST00000219299 PCDH18Q9HCL0 1135 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 GTSE1Q9NYZ3 720 aa9.59□□□□□ -0.87
CCDC113-201ENST00000219299 C16orf96A6NNT2 1141 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 BTNL10A8MVZ5 291 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 SNX2O60749 519 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 KLHL2O95198 593 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 PROZP22891 400 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 CTGFP29279 349 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 HSD17B3P37058 310 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 ATXN1P54253 815 aaKnown RBP9.58□□□□□ -0.88
CCDC113-201ENST00000219299 ALDH18A1P54886 795 aaKnown RBP9.58□□□□□ -0.88
CCDC113-201ENST00000219299 GPR17Q13304 367 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 USP10Q14694 798 aaKnown RBP9.58□□□□□ -0.88
CCDC113-201ENST00000219299 UBXN11Q5T124 520 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.58□□□□□ -0.88
CCDC113-201ENST00000219299 ZC3H3Q8IXZ2 948 aaKnown RBP9.58□□□□□ -0.88
CCDC113-201ENST00000219299 LRRC34Q8IZ02 419 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 LPCAT1Q8NF37 534 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 CMTM5Q96DZ9 223 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 BTN2A3PQ96KV6 586 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 PPP1R10Q96QC0 940 aaKnown RBP9.58□□□□□ -0.88
CCDC113-201ENST00000219299 SLC9A7Q96T83 725 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 ELAC1Q9H777 363 aaKnown RBP9.58□□□□□ -0.88
CCDC113-201ENST00000219299 TNS1Q9HBL0 1735 aaKnown RBP9.58□□□□□ -0.88
CCDC113-201ENST00000219299 E2F8A0AVK6 867 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 B2RBV5 119 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 MMP13P45452 471 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 PTRHD1Q6GMV3 140 aaKnown RBP9.58□□□□□ -0.88
CCDC113-201ENST00000219299 BBS12Q6ZW61 710 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 PACS2Q86VP3 889 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 LMO3Q8TAP4 145 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 FNIP1Q8TF40 1166 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 NAF1Q96HR8 494 aaKnown RBP9.58□□□□□ -0.88
CCDC113-201ENST00000219299 HES6Q96HZ4 224 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 ZNF670Q9BS34 389 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 CRTAC1Q9NQ79 661 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 TLR9Q9NR96 1032 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 RHBDL2Q9NX52 303 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 CLDND1Q9NY35 253 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 PSMC3IPQ9P2W1 217 aaPredicted RBP9.58□□□□□ -0.88
CCDC113-201ENST00000219299 CDK5RAP2Q96SN8 1893 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 CFAP99D6REC4 459 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 TMCC1O94876 653 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 SOD2P04179 222 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 RAB30Q15771 203 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 ADRM1Q16186 407 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 LRRC36Q1X8D7 754 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 SUSD6Q92537 303 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 ARL8AQ96BM9 186 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 THTPAQ9BU02 230 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 ADGRE3Q9BY15 652 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 BRD9Q9H8M2 597 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 SMCHD1A6NHR9 2005 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 PTPRZ1P23471 2315 aaPredicted RBP9.58□□□□□ -0.88
CCDC113-201ENST00000219299 C2CD4BA6NLJ0 364 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 A8MX80 341 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 CYP4F8P98187 520 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 CCDC142Q17RM4 750 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 FNDC3BQ53EP0 1204 aaKnown RBP9.58□□□□□ -0.88
CCDC113-201ENST00000219299 SH3PXD2AQ5TCZ1 1133 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 SYPL2Q5VXT5 272 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 HS6ST3Q8IZP7 471 aa9.58□□□□□ -0.88
CCDC113-201ENST00000219299 TMCO5AQ8N6Q1 288 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms