RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Cpxm2Q9D2L5 764 aa14.63□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ttc9bQ9D6E4 239 aa14.63□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Chmp2aQ9DB34 222 aa14.63□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ropn1Q9ESG2 212 aa14.63□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Plod1Q9R0E2 728 aa14.63□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Gm29133A0A1B0GT72 266 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Zscan5bB2RTN3 468 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Serpina3iD3Z450 408 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Vmn2r88L7N1W8 857 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ring1O35730 406 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Sept7O55131 436 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Eef1bO70251 225 aaKnown RBP14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Rtn2O70622 471 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Aff3P51827 1254 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 PctpP53808 214 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 NrlP54846 237 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 CidecP56198 239 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Dpf3P58269 378 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Rab6bP61294 208 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Sycp3P70281 254 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 RnaselQ05921 735 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Pecam1Q08481 727 aaKnown RBP14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Zbtb48Q1H9T6 681 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 McuQ3UMR5 350 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Kpna1Q60960 538 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ltbp3Q61810 1268 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ndrg1Q62433 394 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Cpa4Q6P8K8 420 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ccdc154Q6RUT8 657 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ccdc50Q810U5 305 aaKnown RBP14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Kctd13Q8BGV7 329 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Wasf2Q8BH43 497 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Mpp7Q8BVD5 576 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Arhgap18Q8K0Q5 663 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Sec63Q8VHE0 760 aaKnown RBP14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Lrp8Q924X6 996 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ophn1Q99J31 802 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Rpl17Q9CPR4 184 aaKnown RBP14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Pgm1Q9D0F9 562 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Sun1Q9D666 913 aaKnown RBP14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Tsga13Q9DA17 273 aa14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Lama2Q60675 3118 aaKnown RBP14.62□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Rhox3fA2ANE1 215 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Gm14496K7N5U4 849 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Vmn2r111K7N674 857 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Tnfrsf11bO08712 401 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Art2bO35975 289 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 SftpbP50405 377 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Cdo1P60334 200 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 FerP70451 823 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Sdr16c6Q05A13 316 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Fbxw2Q60584 422 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ripor1Q68FE6 1223 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Rtl3Q6P1Y1 553 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ssxb5Q6XAS2 159 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Dpy19l3Q71B07 716 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Abcg2Q7TMS5 657 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ip6k2Q80V72 448 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Fut11Q8BHC9 489 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Gtf3c4Q8BMQ2 817 aaKnown RBP14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Q8C4P0 716 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Rfx6Q8C7R7 927 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Smoc2Q8CD91 447 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Mta1Q8K4B0 715 aaKnown RBP14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 TgdsQ8VDR7 355 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Bag2Q91YN9 210 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Kif12Q9D2Z8 642 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Crlf3Q9Z2L7 442 aa14.61□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Baz2aQ91YE5 1889 aaKnown RBP14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Vmn2r27D3YUK6 857 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ccdc8D3YZV8 685 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Lilra5D3Z7A9 295 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 SmgcF6VRN1 385 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Akain1G3UWD5 69 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Vmn1r39G3UWE6 305 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Grip2G3XA20 1042 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 BC024978J3QPC3 361 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 KlO35082 1014 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 GnazO70443 355 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 ZfaP23607 742 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Cxcr2P35343 359 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ppp3ccP48455 513 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Lhx3P50481 400 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Acot8P58137 320 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Fmo3P97501 534 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Wbp2P97765 261 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Myadml2Q08AU7 307 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Prmt9Q3U3W5 846 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Gm29609Q3UU56 907 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Gstt2Q61133 244 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Colgalt2Q6NVG7 625 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Spata24Q6P926 205 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Stambpl1Q76N33 436 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ddhd1Q80YA3 547 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ofcc1Q8BGX4 166 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Thnsl1Q8BH55 747 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Gtf3c2Q8BL74 907 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Acbd3Q8BMP6 525 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Caap1Q8VDY9 356 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Pcdhb11Q91UZ8 797 aa14.6□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 81.3 ms