RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Gemin2Q9CQQ4 269 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Gpihbp1Q9D1N2 228 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ten1Q9D7K2 161 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Q9D9D9 101 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Sgf29Q9DA08 293 aaKnown RBP13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 AadatQ9WVM8 425 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Plxna3P70208 1872 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Rpl9-ps6A0A140T8T4 192 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Slfn8B1ARD8 910 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 UprtB1AVZ0 310 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Taf4E9QAP7 1042 aaKnown RBP13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Akain1G3UWD5 69 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tnk2O54967 1055 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 P01641 117 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 ChrngP04760 519 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Rnf19aP50636 840 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Rpl9P51410 192 aaKnown RBP13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ccna2P51943 422 aaKnown RBP13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ndst2P52850 883 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 AxlQ00993 888 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Calb2Q08331 271 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Dact3Q0PHV7 610 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Slc22a16Q497L8 649 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 GstcdQ5RL51 634 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Kpna1Q60960 538 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Grid2Q61625 1007 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 MafkQ61827 156 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Dmc1Q61880 340 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Cyp2c29Q64458 490 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 WlsQ6DID7 541 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Dpy19l3Q71B07 716 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Deup1Q7M6Y5 601 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Olfr1198Q7TR12 308 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Rpp38Q80UU2 280 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Pcid2Q8BFV2 399 aaKnown RBP13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Mterf2Q8BKY8 385 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tmco6Q8BQX5 494 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ston2Q8BZ60 895 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 PreplQ8C167 725 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Prr33Q8C494 260 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ces2aQ8QZR3 558 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Setd7Q8VHL1 366 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Pip4k2cQ91XU3 421 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tcaf2Q921K8 919 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Aco2Q99KI0 780 aaKnown RBP13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ola1Q9CZ30 396 aaKnown RBP13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Q9D454 513 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ubqln5Q9D4I8 510 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 M1apQ9Z0E1 529 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Top3bQ9Z321 862 aaKnown RBP13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Gm13212B1ASQ7 799 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Prpmp5E9PXN1 296 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Zfp780bE9Q2S6 806 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Syngr1O55100 234 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Rpl36P47964 105 aaKnown RBP13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 TubP50586 505 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Zfp607aQ3TQG9 686 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Cyp2c66Q5GLZ0 490 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Eif2dQ61211 570 aaKnown RBP13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Arl13bQ640N2 427 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Kiaa1841Q68FF0 718 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Cntn4Q69Z26 1026 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Sh3rf1Q69ZI1 892 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tmcc1Q69ZZ6 649 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Exoc3l4Q6DIA2 721 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Cdc14bQ6PFY9 485 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Paqr6Q6TCG5 343 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Arhgap29Q8CGF1 1266 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tada2aQ8CHV6 443 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Acad10Q8K370 1069 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Cgref1Q8R1U2 281 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 CtbsQ8R242 366 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Rps6kl1Q8R2S1 544 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 SarafQ8R3Q0 334 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Pglyrp2Q8VCS0 530 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Mob2Q8VI63 235 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Trmt11Q9CWH5 460 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ndufaf1Q9CWX2 328 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Subh2bvQ9D9Z7 123 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ccdc22Q9JIG7 627 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 D7h11orf16Q9JJR6 402 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 CasrQ9QY96 1079 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 H2afyQ9QZQ8 372 aaKnown RBP13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Hao1Q9WU19 370 aa13.59□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Bclaf3A2AG58 752 aaKnown RBP13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Gm11239E9Q5Z9 360 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Gm11237F2Z3W5 360 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Gm11238F2Z478 360 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Gfra2O08842 464 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Sept7O55131 436 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 P01673 111 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Hoxd8P23463 289 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Cyp2c38P56655 490 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Cdh6P97326 790 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Psmb4P99026 264 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Adcy6Q01341 1165 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Gm428Q3UTE2 360 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ksr1Q61097 873 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Gstt2Q61133 244 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 HiraQ61666 1015 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms