RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ap4s1Q9WVL1 144 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cntnap5aQ0V8T9 1304 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Arid2E9Q7E2 1828 aa13.68□□□□□ -0.22
Nup88-201ENSMUST00000035283 Mindy4b-psA0A1W2P7H6 457 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Kcng1A2BDX4 514 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Ankrd34aB2RW11 495 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cyp2b10P12791 500 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Jak1P52332 1153 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Sycp3P70281 254 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 HdxQ14B70 692 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gm1604bQ3TRG0 118 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gm4981Q3ULJ8 291 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rbm20Q3UQS8 1199 aaKnown RBP13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Armcx5Q3UZB0 606 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Slc20a1Q61609 681 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Krt32Q62168 407 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Itga3Q62470 1053 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cypt2Q6P924 180 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rxfp1Q6R6I7 758 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Disc1Q811T9 852 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rap2cQ8BU31 183 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Anapc2Q8BZQ7 837 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 ClyblQ8R4N0 338 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Olfr393Q8VGR6 312 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Vta1Q9CR26 309 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Upk1aQ9D132 257 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Echdc3Q9D7J9 300 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Akt3Q9WUA6 479 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Kcnt2D3Z649 1135 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 JhyE9Q793 770 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Ifi206G3UZV2 921 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Zfp850J3QPC5 689 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Phkg1P07934 388 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 L1camP11627 1260 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Hmgb2P30681 210 aaKnown RBP13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 DmpkP54265 631 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Acot8P58137 320 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 GmpsQ3THK7 693 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Lrrc14bQ3UJB3 510 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Tmem102Q3UPR7 509 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Slc22a16Q497L8 649 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Prrt3Q6PE13 971 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Atxn7l2Q8C8K6 696 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Samd4aQ8CBY1 711 aaKnown RBP13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Sulf1Q8K007 870 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Olfr356Q8VFP5 315 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Mrps18aQ99N85 196 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Atp6v1g1Q9CR51 118 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Acbd6Q9D061 282 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Batf3Q9D275 118 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Bcas2Q9D287 225 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Kctd4Q9D7X1 259 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Dcaf6Q9DC22 876 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rmdn1Q9DCV4 305 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Grm3Q9QYS2 879 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Copg1Q9QZE5 874 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cry2Q9R194 592 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Map3k14Q9WUL6 942 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 Arid3bQ9Z1N7 568 aa13.67□□□□□ -0.22
Nup88-201ENSMUST00000035283 InhbcP55104 352 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Eml1Q05BC3 814 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cyp2c67Q569X9 491 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Slc5a10Q5SWY8 596 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gpr65Q61038 337 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Abcd2Q61285 741 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Wscd1Q80XH4 572 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 OsgepQ8BWU5 335 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Adprhl2Q8CG72 370 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Ssxb1Q9CPU1 170 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Adgrf4Q9D2L6 698 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Chit1Q9D7Q1 464 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 NvlQ9DBY8 855 aaKnown RBP13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gm4302E9PX25 294 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rgs2O08849 211 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Top3aO70157 1003 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Dync1i2O88487 612 aaKnown RBP13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Slc2a7P0C6A1 513 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Fgl2P12804 432 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Itih1Q61702 907 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Ggnbp1Q6K1E7 370 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Tigd3Q7TM95 470 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Olfr295Q7TS08 309 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Eif4bQ8BGD9 611 aaKnown RBP13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Fbxw21Q8BI38 468 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Ankrd52Q8BTI7 1076 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Wdr59Q8C0M0 992 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cog4Q8R1U1 785 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gprc5bQ923Z0 410 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Dok4Q99KE3 325 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Pkp2Q9CQ73 795 aaKnown RBP13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Dus2Q9D7B1 493 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Clca1Q9D7Z6 913 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 PyglQ9ET01 850 aa13.66□□□□□ -0.22
Nup88-201ENSMUST00000035283 Nlrp12E9Q5R7 1054 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gm5160F8VPN3 147 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Mcpt1P11034 246 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 RxrgP28705 463 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Il12bP43432 335 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Htr4P97288 388 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Cog7Q3UM29 770 aa13.65□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms