RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Adora2bQ60614 332 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Nr1h2Q60644 446 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Galnt10Q6P9S7 603 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Cyp2r1Q6VVW9 501 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gpr139Q80UC8 345 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Wscd1Q80XH4 572 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Lrrc27Q80YS5 523 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Enpp4Q8BTJ4 456 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Pabpc5Q8C7D3 381 aaKnown RBP12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Hacd3Q8K2C9 362 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gprc5bQ923Z0 410 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Sh2d4aQ9D7V1 421 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Spag6Q9JLI7 507 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Egfl7Q9QXT5 275 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Trpc2Q9R244 1172 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Scn9aQ62205 1984 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ces1bD3Z5G7 567 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 PtprcP06800 1291 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gli1P47806 1111 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Pfdn6Q03958 127 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Trpc1Q61056 793 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Pde1aQ61481 565 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Epb41l5Q8BGS1 731 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gtf2a1lQ8R4I4 468 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Sntg2Q925E0 539 aa12.96□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gbp11A9YVJ5 442 aa12.96□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Inpp5aE9QAS7 422 aa12.96□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Dhx15O35286 795 aaKnown RBP12.96□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Q3U4G0 281 aa12.96□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Casc4Q6P2L7 435 aa12.96□□□□□ -0.34
Clcn3-201ENSMUST00000004430 TxlngQ8BHN1 524 aa12.96□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Qsox1Q8BND5 748 aa12.96□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Sorcs3Q8VI51 1219 aa12.96□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ttc30bQ9CY00 664 aa12.96□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ppp1r2Q9DCL8 206 aa12.96□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Mtcl1Q3UHU5 1945 aa12.96□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Phf11A6H5X4 337 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 SelenovD3YXG1 328 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Magee2Q52KG3 523 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Satb1Q60611 764 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Lcp1Q61233 627 aaKnown RBP12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fam181bQ80VF6 417 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Rbm22Q8BHS3 420 aaKnown RBP12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Lrrc19Q8BZT5 364 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Vmn1r191Q8K4D0 298 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tfap2dQ91ZK0 452 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Trps1Q925H1 1281 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Trim8Q99PJ2 551 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Taf1dQ9D4V4 322 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Coro1cQ9WUM4 474 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Kcnd2Q9Z0V2 630 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Smim10l2aA0A0B4J1F8 78 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pramef17A2ASJ1 475 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 1600015I10RikE9Q745 711 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Zfp358E9Q8M1 571 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Nkx1-1G3UXB3 402 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gm6408J3QNG1 320 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Mtnd4P03911 459 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Kcnc2Q14B80 642 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Trmt10cQ3UFY8 414 aaKnown RBP12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Nat9Q3UG98 241 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Avpr1aQ62463 423 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Spag16Q8K450 639 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 CmasQ99KK2 432 aaKnown RBP12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Mrps5Q99N87 432 aaKnown RBP12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Slc25a11Q9CR62 314 aaKnown RBP12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Lrrc17Q9CXD9 443 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pbld2Q9CXN7 288 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Bace2Q9JL18 514 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Mmp14P53690 582 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gxylt1Q3UHH8 404 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 GaleQ8R059 347 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 GldcQ91W43 1025 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Rsl24d1Q99L28 163 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Serpinb9bQ9DAV6 377 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Slc29a1Q9JIM1 460 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Map3k6Q9WTR2 1291 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Slc26a3Q9WVC8 757 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 4921501E09RikA0A0R4J054 908 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gm21964A0A1W2P7S4 437 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Kcng1A2BDX4 514 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pold2O35654 469 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Cdh5P55284 784 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Naa20P61600 178 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Rundc3bQ6PDC0 408 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tdpoz3Q717B4 365 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Olfr212Q7TS33 327 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 NaprtQ8CC86 538 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fam160b1Q8CDM8 764 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Micu1Q8VCX5 477 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Cyp2c70Q91W64 489 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Sec16bQ91XT4 1051 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pcdha1Q91Y21 948 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 MtrexQ9CZU3 1040 aaKnown RBP12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tmem79Q9D709 391 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ten1Q9D7K2 161 aa12.95□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Vmn2r74E9PW21 853 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gm8267E9Q207 261 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Per3O70361 1113 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Zc3h15Q3TIV5 426 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 73 ms