RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 IFNA14P01570 189 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 CCNA2P20248 432 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 MASP1P48740 699 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 BST2Q10589 180 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 GNA13Q14344 377 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 MIEF2Q96C03 454 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 IL6P05231 212 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 HDCP19113 662 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 FXR1P51114 621 aaKnown RBP eCLIP18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 KLHDC7AQ5VTJ3 777 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 DAB2IPQ5VWQ8 1189 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 METTL7BQ6UX53 244 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 UBA2Q9UBT2 640 aaPredicted RBP18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 KCNJ5P48544 419 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 MAXP61244 160 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 TBC1D25Q3MII6 688 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 TRPM8Q7Z2W7 1104 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 ATG9AQ7Z3C6 839 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 ZIM3Q96PE6 472 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 NYAP2Q9P242 653 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 BTBD3Q9Y2F9 522 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 CAMTA2O94983 1202 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 SERPINF2P08697 491 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 SYN1P17600 705 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 NT5C2P49902 561 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 KCNMB4Q86W47 210 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 OMA1Q96E52 524 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 GMEB2Q9UKD1 530 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 CLDN5O00501 218 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 GAS2O43903 313 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 BUD31P41223 144 aaPredicted RBP18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 TARBP2Q15633 366 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 PKN2Q16513 984 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 MPPE1Q53F39 396 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 KCTD8Q6ZWB6 473 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 ZNF655Q8N720 491 aaPredicted RBP18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 METTL6Q8TCB7 284 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 LRRC40Q9H9A6 602 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 MCCC2Q9HCC0 563 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 AGO4Q9HCK5 861 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 MARK1Q9P0L2 795 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 CD3EAPO15446 510 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 PON1P27169 355 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 HOXC12P31275 282 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 PEG10Q86TG7 708 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 SMARCD1Q96GM5 515 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 TLE6Q9H808 572 aa18.12■□□□□ 0.49
CACNA1A-227ENST00000636549 ERVK-7P63135 1459 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 A8MU76 341 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 GLRA3O75311 464 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 SLC1A6P48664 564 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 HNMTP50135 292 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 MPP3Q13368 585 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 VPS72Q15906 364 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 ZNF611Q8N823 705 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 GPER1Q99527 375 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 ARF3P61204 181 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 ARF1P84077 181 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 PDIA5Q14554 519 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 BNC2Q6ZN30 1099 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 BRINP2Q9C0B6 783 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 TBC1D13Q9NVG8 400 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 SLC12A4Q9UP95 1085 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 INVSQ9Y283 1065 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 BTRCQ9Y297 605 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 WBP11Q9Y2W2 641 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 DNTTP04053 509 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 LSM3P62310 102 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 TOP1MTQ969P6 601 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 CCT8L2Q96SF2 557 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 P2RX7Q99572 595 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 C7orf25Q9BPX7 421 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 NOL6Q9H6R4 1146 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 KANSL3Q9P2N6 904 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 ZNF222Q9UK12 451 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 METTL21CQ5VZV1 264 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 KCT2Q8NC54 265 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 DNAJC9Q8WXX5 260 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 SYNMO15061 1565 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 NAMPTP43490 491 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 DEFB115Q30KQ5 88 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 ARMC8Q8IUR7 673 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 ASB8Q9H765 288 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 CAB39LQ9H9S4 337 aa18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-227ENST00000636549 KIRREL3Q8IZU9 778 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 ZNF558Q96NG5 402 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 DCUN1D5Q9BTE7 237 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 BCLAF3A2AJT9 711 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 IQCF5A8MTL0 148 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 RPL9P32969 192 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 IGFALSP35858 605 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 HHIPL2Q6UWX4 724 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 DEF8Q6ZN54 512 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 VPS33BQ9H267 617 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 EPB41L4AQ9HCS5 686 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 CD248Q9HCU0 757 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 FBXO6Q9NRD1 293 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms