RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 OR7D4Q8NG98 312 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 FRS2Q8WU20 508 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 FAM172AQ8WUF8 416 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 SNX19Q92543 992 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 FOXJ1Q92949 421 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 FAM129BQ96TA1 746 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 TTYH3Q9C0H2 523 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 MUC3BQ9H195 1237 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 PABPC3Q9H361 631 aaKnown RBP12.63□□□□□ -0.39
CTSA-210ENST00000606000 FBRSQ9HAH7 460 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 ZNF212Q9UDV6 495 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 EIF2B4Q9UI10 523 aaKnown RBP12.63□□□□□ -0.39
CTSA-210ENST00000606000 SLC6A14Q9UN76 642 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 NEU3Q9UQ49 428 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 TP53BP1Q12888 1972 aaPredicted RBP12.63□□□□□ -0.39
CTSA-210ENST00000606000 BNIP3LO60238 219 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 SEMA4FO95754 770 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 MT-CO1P00395 513 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 CALB1P05937 261 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 RRM1P23921 792 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 HOXD12P35452 270 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 PTPN9P43378 593 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 OGDHQ02218 1023 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 MTA1Q13330 715 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 ARID5BQ14865 1188 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 NR1I3Q14994 352 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 ASIC2Q16515 512 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 ZSCAN23Q3MJ62 389 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 POM121L1PQ3SYA9 428 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 TTC31Q49AM3 519 aaPredicted RBP12.62□□□□□ -0.39
CTSA-210ENST00000606000 FILIP1LQ4L180 1135 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 PPP1R15BQ5SWA1 713 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 SYCP2LQ5T4T6 812 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 ACAD10Q6JQN1 1059 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 DNAJC24Q6P3W2 148 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 LAYNQ6UX15 382 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 LRRC31Q6UY01 552 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 LINGO4Q6UY18 593 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 Q6ZVU0 165 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 DRC7Q8IY82 874 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 KDM1BQ8NB78 822 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 CADM4Q8NFZ8 388 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 GANCQ8TET4 914 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 DNASE2BQ8WZ79 361 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 C1orf74Q96LT6 269 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 MCEEQ96PE7 176 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 HAPLN3Q96S86 360 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 BTBD1Q9H0C5 482 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 NEUROG2Q9H2A3 272 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 HAUS4Q9H6D7 363 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 NDFIP2Q9NV92 336 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 FBXL12Q9NXK8 326 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 VPS51Q9UID3 782 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 SLC25A13Q9UJS0 675 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 PAXBP1Q9Y5B6 917 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 ACTL7AQ9Y615 435 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 NUMA1Q14980 2115 aa12.62□□□□□ -0.39
CTSA-210ENST00000606000 TMEM131Q92545 1883 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 SPTBN4Q9H254 2564 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 A0A1W2PQC6 194 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 TARSL2A2RTX5 802 aaKnown RBP12.61□□□□□ -0.39
CTSA-210ENST00000606000 FAM47DPA6NHR8 397 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 RNF103O00237 685 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 SMAD6O43541 496 aaKnown RBP12.61□□□□□ -0.39
CTSA-210ENST00000606000 RNASEH2AO75792 299 aaKnown RBP12.61□□□□□ -0.39
CTSA-210ENST00000606000 FSBPO95073 299 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 SKILP12757 684 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 SRCP12931 536 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 TNFAIP3P21580 790 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 OR1E1P30953 314 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 SLC8A1P32418 973 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 ADRA1BP35368 520 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 DPP6P42658 865 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 FANCCQ00597 558 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 FOXK2Q01167 660 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 BNC1Q01954 994 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 ZBTB16Q05516 673 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 GFPT1Q06210 699 aaPredicted RBP12.61□□□□□ -0.39
CTSA-210ENST00000606000 SULT2A1Q06520 285 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 GRIK2Q13002 908 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 ACCSLQ4AC99 568 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 WDR45BQ5MNZ6 344 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 MANEALQ5VSG8 457 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 PSAPL1Q6NUJ1 521 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 STRADAQ7RTN6 431 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 ZNF571Q7Z3V5 609 aaPredicted RBP12.61□□□□□ -0.39
CTSA-210ENST00000606000 MCOLN2Q8IZK6 566 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 PYROXD2Q8N2H3 581 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 SH2D3CQ8N5H7 860 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 MINDY1Q8N5J2 469 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 CEP76Q8TAP6 659 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 CENPIQ92674 756 aaPredicted RBP12.61□□□□□ -0.39
CTSA-210ENST00000606000 BIRC7Q96CA5 298 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 ZYG11BQ9C0D3 744 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 SARDHQ9UL12 918 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.61□□□□□ -0.39
CTSA-210ENST00000606000 CEP250Q9BV73 2442 aa12.61□□□□□ -0.39
CTSA-210ENST00000606000 SIGLEC16A6NMB1 481 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 DDX3XO00571 662 aaKnown RBP eCLIP12.6□□□□□ -0.39
CTSA-210ENST00000606000 ARHGAP33O14559 1287 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms