RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 DPYSQ14117 519 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 ANGPT1Q15389 498 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 CRY1Q16526 586 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 SERPINA13PQ6UXR4 307 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 RHOT1Q8IXI2 618 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 RNF10Q8N5U6 811 aaKnown RBP14.23□□□□□ -0.13
RNF40-212ENST00000602784 DCAF4L2Q8NA75 395 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 KCTD6Q8NC69 237 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 UBE2Q2Q8WVN8 375 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 SORCS1Q8WY21 1168 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 CSPG4P5Q96PW8 444 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 ACE2Q9BYF1 805 aaPredicted RBP14.23□□□□□ -0.13
RNF40-212ENST00000602784 IRF2BPLQ9H1B7 796 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 TMEM245Q9H330 911 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 PCDH18Q9HCL0 1135 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 NDFIP2Q9NV92 336 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 C2orf42Q9NWW7 574 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 DNAI1Q9UI46 699 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 ERVW-1Q9UQF0 538 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 CACNA1HO95180 2353 aa14.23□□□□□ -0.13
RNF40-212ENST00000602784 CCDC163A0A0D9SF12 145 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 K7ESF4 209 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 PSTPIP1O43586 416 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 KRT86O43790 486 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 SPOPO43791 374 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 RAMP2O60895 175 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 CCDC175P0C221 793 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 TDGF1P13385 188 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 ERCC2P18074 760 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 IL4RP24394 825 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 NNMTP40261 264 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 IL12RB1P42701 662 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 NDST2P52849 883 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 NRLP54845 237 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 CDH6P55285 790 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 ST8SIA6P61647 398 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 SLC20A2Q08357 652 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 KRT81Q14533 505 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 POLD3Q15054 466 aaPredicted RBP14.22□□□□□ -0.13
RNF40-212ENST00000602784 PARP15Q460N3 678 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 ATP13A4Q4VNC1 1196 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 DAAM2Q86T65 1068 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 LZTR1Q8N653 840 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 KIAA1524Q8TCG1 905 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 CYB5D2Q8WUJ1 264 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 NELL1Q92832 810 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 ARHGEF2Q92974 986 aaKnown RBP14.22□□□□□ -0.13
RNF40-212ENST00000602784 MYO19Q96H55 970 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 MRGPRX3Q96LB0 322 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 PSMB7Q99436 277 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 ZNF670Q9BS34 389 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 NOL6Q9H6R4 1146 aaKnown RBP14.22□□□□□ -0.13
RNF40-212ENST00000602784 PRDM16Q9HAZ2 1276 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 CD248Q9HCU0 757 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 POLMQ9NP87 494 aaPredicted RBP14.22□□□□□ -0.13
RNF40-212ENST00000602784 CACNA2D2Q9NY47 1150 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 DDX56Q9NY93 547 aaKnown RBP14.22□□□□□ -0.13
RNF40-212ENST00000602784 EBF1Q9UH73 591 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 SUN2Q9UH99 717 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 HS3ST2Q9Y278 367 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 CHD5Q8TDI0 1954 aa14.22□□□□□ -0.13
RNF40-212ENST00000602784 A0A1W2PQF6 199 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 BUB1O43683 1085 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 ZMPSTE24O75844 475 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 APBB3O95704 486 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 PTMAP06454 111 aaKnown RBP14.21□□□□□ -0.13
RNF40-212ENST00000602784 C7P10643 843 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 HOXB2P14652 356 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 CTSOP43234 321 aaPredicted RBP14.21□□□□□ -0.13
RNF40-212ENST00000602784 NAP1L1P55209 391 aaKnown RBP14.21□□□□□ -0.13
RNF40-212ENST00000602784 CSTF1Q05048 431 aaKnown RBP14.21□□□□□ -0.13
RNF40-212ENST00000602784 DPYSL3Q14195 570 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 STARD3Q14849 445 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 FNDC3BQ53EP0 1204 aaKnown RBP14.21□□□□□ -0.13
RNF40-212ENST00000602784 AFMIDQ63HM1 303 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 RETSATQ6NUM9 610 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 TMEM92Q6UXU6 159 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 LRRC57Q8N9N7 239 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 OR7D4Q8NG98 312 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 FAF2Q96CS3 445 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 KLC2Q9H0B6 622 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 LRRC19Q9H756 370 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 ATP13A1Q9HD20 1204 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 ZDHHC4Q9NPG8 344 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 VPS51Q9UID3 782 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 SLC25A13Q9UJS0 675 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 HPCAL4Q9UM19 191 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.21□□□□□ -0.13
RNF40-212ENST00000602784 HCN4Q9Y3Q4 1203 aa14.21□□□□□ -0.13
RNF40-212ENST00000602784 ARIH1Q9Y4X5 557 aaPredicted RBP14.21□□□□□ -0.13
RNF40-212ENST00000602784 MUC6Q6W4X9 2439 aa14.21□□□□□ -0.14
RNF40-212ENST00000602784 MUC22E2RYF6 1773 aaPredicted RBP14.2□□□□□ -0.14
RNF40-212ENST00000602784 TARSL2A2RTX5 802 aaKnown RBP14.2□□□□□ -0.14
RNF40-212ENST00000602784 ZSCAN5CA6NGD5 496 aaPredicted RBP14.2□□□□□ -0.14
RNF40-212ENST00000602784 WASH3PC4AMC7 463 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 DCLK1O15075 740 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 ZBTB24O43167 697 aaPredicted RBP14.2□□□□□ -0.14
RNF40-212ENST00000602784 KDELR3O43731 214 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 ATP9BO43861 1147 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 SYNCRIPO60506 623 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms