RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PCDHA11Q9Y5I1 949 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 MYO18AQ92614 2054 aaKnown RBP11.11□□□□□ -0.63
PALB2-206ENST00000568219 TMEM233B4DJY2 109 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 FBP2O00757 339 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 RNASEH2AO75792 299 aaKnown RBP11.1□□□□□ -0.63
PALB2-206ENST00000568219 KRT8P05787 483 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 JAK1P23458 1154 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 ADORA2AP29274 412 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 MYBPC1Q00872 1141 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 NSUN2Q08J23 767 aaKnown RBP eCLIP11.1□□□□□ -0.63
PALB2-206ENST00000568219 ITGA7Q13683 1181 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 LAMC2Q13753 1193 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 PGS1Q32NB8 556 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 CCDC153Q494R4 210 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 RAB6CQ53S08 254 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 SLC39A4Q6P5W5 647 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 SIX5Q8N196 739 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 DNAJB14Q8TBM8 379 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 DLG3Q92796 817 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 CDHR1Q96JP9 859 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 AGAP2Q99490 1192 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 RAB6CQ9H0N0 254 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 SOX17Q9H6I2 414 aaPredicted RBP11.1□□□□□ -0.63
PALB2-206ENST00000568219 PCDH12Q9NPG4 1184 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 SEPT3Q9UH03 358 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 PRPF19Q9UMS4 504 aaKnown RBP11.1□□□□□ -0.63
PALB2-206ENST00000568219 TMX2Q9Y320 296 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 TOPAZ1Q8N9V7 1692 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 PTPRJQ12913 1337 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 KPNA4O00629 521 aaPredicted RBP11.1□□□□□ -0.63
PALB2-206ENST00000568219 TRIM38O00635 465 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 PMPCBO75439 489 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 DDHD2O94830 711 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 CCNA2P20248 432 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 IRF9Q00978 393 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 MS4A2Q01362 244 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 IMPG1Q17R60 797 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 CAMK1DQ8IU85 385 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 METTL25Q8N6Q8 603 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 RIN3Q8TB24 985 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 ATG4CQ96DT6 458 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 KIF12Q96FN5 646 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 CERS2Q96G23 380 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 TMEM176AQ96HP8 235 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 FSD1LQ9BXM9 530 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 LRRC40Q9H9A6 602 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 NCKIPSDQ9NZQ3 722 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 VANGL2Q9ULK5 521 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 CHD4Q14839 1912 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 KLF11O14901 512 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 ICAM1P05362 532 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 HALP42357 657 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 ATXN1P54253 815 aaKnown RBP11.1□□□□□ -0.63
PALB2-206ENST00000568219 POLD3Q15054 466 aaPredicted RBP11.1□□□□□ -0.63
PALB2-206ENST00000568219 PGM5Q15124 567 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 PLEKHA8Q96JA3 519 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 SPATA17Q96L03 361 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 RPAP3Q9H6T3 665 aaPredicted RBP11.1□□□□□ -0.63
PALB2-206ENST00000568219 POPDC2Q9HBU9 364 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 ATRNL1Q5VV63 1379 aa11.1□□□□□ -0.63
PALB2-206ENST00000568219 TRPC5OSA6NMA1 111 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 DFFAO00273 331 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 OGTO15294 1046 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 LTFP02788 710 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 HSPA1AP0DMV8 641 aaKnown RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 HSPA1BP0DMV9 641 aaKnown RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 GFAPP14136 432 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 ATP6V1B2P21281 511 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 ALDH4A1P30038 563 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 RXRGP48443 463 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 SULT1E1P49888 294 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 NDST1P52848 882 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 WNT7BP56706 349 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 JAG1P78504 1218 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 PDK2Q15119 407 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 FAM160B1Q5W0V3 765 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 TMEM110Q86TL2 294 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 DQX1Q8TE96 717 aaKnown RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 HTRA1Q92743 480 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 IFT43Q96FT9 208 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 NT5C1AQ9BXI3 368 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 PCDH18Q9HCL0 1135 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 GPRC5DQ9NZD1 345 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 ORC6Q9Y5N6 252 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 GJA3Q9Y6H8 435 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 K7EPI3 171 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 JCHAINP01591 159 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 PRAMEF18Q5VWM3 479 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 TMEM214Q6NUQ4 689 aaKnown RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 TMEM53Q6P2H8 277 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 PLD3Q8IV08 490 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 LRRC39Q96DD0 335 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 MFSD3Q96ES6 412 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 ZFYVE19Q96K21 471 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 ZDHHC15Q96MV8 337 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 DSEQ9UL01 958 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 FADS3Q9Y5Q0 445 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 ST14Q9Y5Y6 855 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 GMEB1Q9Y692 573 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 SF3B1O75533 1304 aaKnown RBP eCLIP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms